7 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4KQP6_9AGAM	Uncharacterized protein. (207 aa)
	W4KCX6_9AGAM	Uncharacterized protein. (215 aa)
	W4KF85_9AGAM	Uncharacterized protein. (216 aa)
	W4KF87_9AGAM	Uncharacterized protein. (194 aa)
	W4KFL9_9AGAM	Uncharacterized protein. (219 aa)
	W4KJR4_9AGAM	Uncharacterized protein. (465 aa)
	W4KJU7_9AGAM	Uncharacterized protein. (249 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4KCX6_9AGAM	W4KF85_9AGAM	W4KCX6	W4KF85	Uncharacterized protein.	Uncharacterized protein.	0.932
W4KCX6_9AGAM	W4KF87_9AGAM	W4KCX6	W4KF87	Uncharacterized protein.	Uncharacterized protein.	0.941
W4KCX6_9AGAM	W4KFL9_9AGAM	W4KCX6	W4KFL9	Uncharacterized protein.	Uncharacterized protein.	0.975
W4KCX6_9AGAM	W4KJR4_9AGAM	W4KCX6	W4KJR4	Uncharacterized protein.	Uncharacterized protein.	0.789
W4KCX6_9AGAM	W4KJU7_9AGAM	W4KCX6	W4KJU7	Uncharacterized protein.	Uncharacterized protein.	0.966
W4KCX6_9AGAM	W4KQP6_9AGAM	W4KCX6	W4KQP6	Uncharacterized protein.	Uncharacterized protein.	0.826
W4KF85_9AGAM	W4KCX6_9AGAM	W4KF85	W4KCX6	Uncharacterized protein.	Uncharacterized protein.	0.932
W4KF85_9AGAM	W4KF87_9AGAM	W4KF85	W4KF87	Uncharacterized protein.	Uncharacterized protein.	0.951
W4KF85_9AGAM	W4KFL9_9AGAM	W4KF85	W4KFL9	Uncharacterized protein.	Uncharacterized protein.	0.998
W4KF85_9AGAM	W4KJR4_9AGAM	W4KF85	W4KJR4	Uncharacterized protein.	Uncharacterized protein.	0.974
W4KF85_9AGAM	W4KJU7_9AGAM	W4KF85	W4KJU7	Uncharacterized protein.	Uncharacterized protein.	0.998
W4KF85_9AGAM	W4KQP6_9AGAM	W4KF85	W4KQP6	Uncharacterized protein.	Uncharacterized protein.	0.984
W4KF87_9AGAM	W4KCX6_9AGAM	W4KF87	W4KCX6	Uncharacterized protein.	Uncharacterized protein.	0.941
W4KF87_9AGAM	W4KF85_9AGAM	W4KF87	W4KF85	Uncharacterized protein.	Uncharacterized protein.	0.951
W4KF87_9AGAM	W4KFL9_9AGAM	W4KF87	W4KFL9	Uncharacterized protein.	Uncharacterized protein.	0.968
W4KF87_9AGAM	W4KJR4_9AGAM	W4KF87	W4KJR4	Uncharacterized protein.	Uncharacterized protein.	0.624
W4KF87_9AGAM	W4KJU7_9AGAM	W4KF87	W4KJU7	Uncharacterized protein.	Uncharacterized protein.	0.999
W4KF87_9AGAM	W4KQP6_9AGAM	W4KF87	W4KQP6	Uncharacterized protein.	Uncharacterized protein.	0.710
W4KFL9_9AGAM	W4KCX6_9AGAM	W4KFL9	W4KCX6	Uncharacterized protein.	Uncharacterized protein.	0.975
W4KFL9_9AGAM	W4KF85_9AGAM	W4KFL9	W4KF85	Uncharacterized protein.	Uncharacterized protein.	0.998