(5 nodes) Heat shock protein 70, conserved site network (Heterobasidion irregulare)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4K2B1_9AGAM	Uncharacterized protein; Belongs to the heat shock protein 70 family. (675 aa)
	W4K5V6_9AGAM	Uncharacterized protein. (774 aa)
	W4KI26_9AGAM	Uncharacterized protein; Belongs to the heat shock protein 70 family. (612 aa)
	W4JMQ7_9AGAM	Uncharacterized protein; Belongs to the heat shock protein 70 family. (666 aa)
	W4KJD9_9AGAM	Uncharacterized protein; Belongs to the heat shock protein 70 family. (654 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JMQ7_9AGAM	W4K2B1_9AGAM	W4JMQ7	W4K2B1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.606
W4JMQ7_9AGAM	W4K5V6_9AGAM	W4JMQ7	W4K5V6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.899
W4JMQ7_9AGAM	W4KI26_9AGAM	W4JMQ7	W4KI26	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.615
W4JMQ7_9AGAM	W4KJD9_9AGAM	W4JMQ7	W4KJD9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.613
W4K2B1_9AGAM	W4JMQ7_9AGAM	W4K2B1	W4JMQ7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.606
W4K2B1_9AGAM	W4K5V6_9AGAM	W4K2B1	W4K5V6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.714
W4K2B1_9AGAM	W4KI26_9AGAM	W4K2B1	W4KI26	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.784
W4K2B1_9AGAM	W4KJD9_9AGAM	W4K2B1	W4KJD9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.596
W4K5V6_9AGAM	W4JMQ7_9AGAM	W4K5V6	W4JMQ7	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.899
W4K5V6_9AGAM	W4K2B1_9AGAM	W4K5V6	W4K2B1	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.714
W4K5V6_9AGAM	W4KI26_9AGAM	W4K5V6	W4KI26	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.823
W4K5V6_9AGAM	W4KJD9_9AGAM	W4K5V6	W4KJD9	Uncharacterized protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.824
W4KI26_9AGAM	W4JMQ7_9AGAM	W4KI26	W4JMQ7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.615
W4KI26_9AGAM	W4K2B1_9AGAM	W4KI26	W4K2B1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.784
W4KI26_9AGAM	W4K5V6_9AGAM	W4KI26	W4K5V6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.823
W4KI26_9AGAM	W4KJD9_9AGAM	W4KI26	W4KJD9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.926
W4KJD9_9AGAM	W4JMQ7_9AGAM	W4KJD9	W4JMQ7	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.613
W4KJD9_9AGAM	W4K2B1_9AGAM	W4KJD9	W4K2B1	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.596
W4KJD9_9AGAM	W4K5V6_9AGAM	W4KJD9	W4K5V6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.824
W4KJD9_9AGAM	W4KI26_9AGAM	W4KJD9	W4KI26	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.926