(31 nodes) Ribosomal protein S5 domain 2-type fold network (Heterobasidion irregulare)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	W4KLD2_9AGAM	Uncharacterized protein. (270 aa)
	W4KPD8_9AGAM	GHMP_kinases_N domain-containing protein. (352 aa)
	W4KNV6_9AGAM	Tr-type G domain-containing protein. (842 aa)
	W4KMG5_9AGAM	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (144 aa)
	W4KLW3_9AGAM	Tr-type G domain-containing protein. (1517 aa)
	W4KJG7_9AGAM	HATPase_c domain-containing protein. (701 aa)
	W4KJ50_9AGAM	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (201 aa)
	W4KGJ5_9AGAM	Uncharacterized protein. (837 aa)
	W4KG24_9AGAM	Uncharacterized protein. (353 aa)
	W4KE74_9AGAM	Uncharacterized protein. (812 aa)
	W4KDW3_9AGAM	Uncharacterized protein. (549 aa)
	W4KCS2_9AGAM	Uncharacterized protein. (914 aa)
	PIM1	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (1081 aa)
	W4KAW0_9AGAM	RNase_PH domain-containing protein. (338 aa)
	W4K7X7_9AGAM	Tr-type G domain-containing protein. (1068 aa)
	W4K786_9AGAM	UPF0029 domain-containing protein. (138 aa)
	W4K6D6_9AGAM	Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. (403 aa)
	W4K4G1_9AGAM	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (297 aa)
	W4K3Y3_9AGAM	Phosphomevalonate kinase; Belongs to the GHMP kinase family. Mevalonate kinase subfamily. (494 aa)
	W4K3K5_9AGAM	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (257 aa)
	W4K258_9AGAM	Lon protease homolog; Belongs to the peptidase S16 family. (926 aa)
	W4JZT1_9AGAM	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1527 aa)
	W4JWQ8_9AGAM	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (227 aa)
	W4JW65_9AGAM	RNase_PH domain-containing protein. (272 aa)
	W4JUF7_9AGAM	RNase_PH domain-containing protein. (335 aa)
	W4JU18_9AGAM	Uncharacterized protein. (298 aa)
	W4JTH8_9AGAM	DNA_mis_repair domain-containing protein. (392 aa)
	W4JST1_9AGAM	DNA_mis_repair domain-containing protein. (772 aa)
	MEF1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (777 aa)
	W4JRD2_9AGAM	Uncharacterized protein. (285 aa)
	W4JMU4_9AGAM	UPF0029 domain-containing protein. (250 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MEF1	W4JWQ8_9AGAM	W4JSE1	W4JWQ8	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.768
MEF1	W4K3K5_9AGAM	W4JSE1	W4K3K5	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.880
MEF1	W4K4G1_9AGAM	W4JSE1	W4K4G1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.799
MEF1	W4KMG5_9AGAM	W4JSE1	W4KMG5	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.612
PIM1	W4KE74_9AGAM	W4KC98	W4KE74	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	Uncharacterized protein.	0.452
PIM1	W4KJG7_9AGAM	W4KC98	W4KJG7	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.	HATPase_c domain-containing protein.	0.452
W4JRD2_9AGAM	W4JU18_9AGAM	W4JRD2	W4JU18	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JRD2_9AGAM	W4JUF7_9AGAM	W4JRD2	W4JUF7	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
W4JRD2_9AGAM	W4JW65_9AGAM	W4JRD2	W4JW65	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
W4JRD2_9AGAM	W4KAW0_9AGAM	W4JRD2	W4KAW0	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
W4JRD2_9AGAM	W4KLD2_9AGAM	W4JRD2	W4KLD2	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JST1_9AGAM	W4JTH8_9AGAM	W4JST1	W4JTH8	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.919
W4JST1_9AGAM	W4KGJ5_9AGAM	W4JST1	W4KGJ5	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.965
W4JTH8_9AGAM	W4JST1_9AGAM	W4JTH8	W4JST1	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.919
W4JTH8_9AGAM	W4KGJ5_9AGAM	W4JTH8	W4KGJ5	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.704
W4JU18_9AGAM	W4JRD2_9AGAM	W4JU18	W4JRD2	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JU18_9AGAM	W4JUF7_9AGAM	W4JU18	W4JUF7	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
W4JU18_9AGAM	W4JW65_9AGAM	W4JU18	W4JW65	Uncharacterized protein.	RNase_PH domain-containing protein.	0.999
W4JU18_9AGAM	W4JWQ8_9AGAM	W4JU18	W4JWQ8	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.604
W4JU18_9AGAM	W4K3K5_9AGAM	W4JU18	W4K3K5	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.624