35 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JYS2_9AGAM	Uncharacterized protein. (347 aa)
	W4JYT1_9AGAM	Ubiquitin-like domain-containing protein. (159 aa)
	W4JZ00_9AGAM	Beta-galactosidase. (1332 aa)
	W4JZ28_9AGAM	Uncharacterized protein. (237 aa)
	W4K051_9AGAM	Uncharacterized protein. (499 aa)
	W4K1W0_9AGAM	Ubiquitin carboxyl-terminal hydrolase. (537 aa)
	W4K2X3_9AGAM	Ubiquitin-like domain-containing protein. (423 aa)
	W4K3N4_9AGAM	Uncharacterized protein. (394 aa)
	W4K410_9AGAM	Uncharacterized protein. (202 aa)
	W4K5Q8_9AGAM	Uncharacterized protein. (381 aa)
	W4K6K6_9AGAM	Ubiquitin-like domain-containing protein. (297 aa)
	W4KP44_9AGAM	MPN domain-containing protein. (660 aa)
	W4KNW8_9AGAM	Ubiquitin-like domain-containing protein. (128 aa)
	W4KMV4_9AGAM	Uncharacterized protein. (494 aa)
	W4KLE1_9AGAM	Uncharacterized protein. (337 aa)
	W4KKP8_9AGAM	Uncharacterized protein. (355 aa)
	W4KK52_9AGAM	Uncharacterized protein; Belongs to the peptidase C19 family. (1173 aa)
	W4KJL6_9AGAM	Uncharacterized protein. (754 aa)
	W4KIJ6_9AGAM	Autophagy-related protein. (127 aa)
	W4KHG4_9AGAM	Ubiquitin-like domain-containing protein. (797 aa)
	W4KG05_9AGAM	Uncharacterized protein. (1390 aa)
	W4KFE0_9AGAM	Ubiquitin-like domain-containing protein. (560 aa)
	W4KEG1_9AGAM	Ubiquitin-like domain-containing protein. (78 aa)
	W4KDY3_9AGAM	Uncharacterized protein. (369 aa)
	W4KD08_9AGAM	UBX domain-containing protein. (267 aa)
	W4K959_9AGAM	PH domain-containing protein. (309 aa)
	W4K781_9AGAM	Rad60-SLD domain-containing protein. (464 aa)
	W4JP57_9AGAM	UBX domain-containing protein. (494 aa)
	W4JPN0_9AGAM	Ubiquitin-like domain-containing protein. (73 aa)
	W4JQ66_9AGAM	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (146 aa)
	W4JR51_9AGAM	Rad60-SLD_2 domain-containing protein. (200 aa)
	W4JTU6_9AGAM	Uncharacterized protein. (353 aa)
	W4JUZ2_9AGAM	Rad60-SLD domain-containing protein. (100 aa)
	W4JV61_9AGAM	Ubiquitin-like domain-containing protein. (102 aa)
	W4JWU7_9AGAM	Ubiquitin-like domain-containing protein. (282 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JP57_9AGAM	W4JTU6_9AGAM	W4JP57	W4JTU6	UBX domain-containing protein.	Uncharacterized protein.	0.821
W4JP57_9AGAM	W4JYS2_9AGAM	W4JP57	W4JYS2	UBX domain-containing protein.	Uncharacterized protein.	0.853
W4JP57_9AGAM	W4KD08_9AGAM	W4JP57	W4KD08	UBX domain-containing protein.	UBX domain-containing protein.	0.832
W4JP57_9AGAM	W4KP44_9AGAM	W4JP57	W4KP44	UBX domain-containing protein.	MPN domain-containing protein.	0.970
W4JPN0_9AGAM	W4K3N4_9AGAM	W4JPN0	W4K3N4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.470
W4JPN0_9AGAM	W4KEG1_9AGAM	W4JPN0	W4KEG1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.797
W4JPN0_9AGAM	W4KIJ6_9AGAM	W4JPN0	W4KIJ6	Ubiquitin-like domain-containing protein.	Autophagy-related protein.	0.451
W4JPN0_9AGAM	W4KJL6_9AGAM	W4JPN0	W4KJL6	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.515
W4JQ66_9AGAM	W4KIJ6_9AGAM	W4JQ66	W4KIJ6	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	Autophagy-related protein.	0.911
W4JR51_9AGAM	W4K1W0_9AGAM	W4JR51	W4K1W0	Rad60-SLD_2 domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.645
W4JR51_9AGAM	W4KLE1_9AGAM	W4JR51	W4KLE1	Rad60-SLD_2 domain-containing protein.	Uncharacterized protein.	0.704
W4JR51_9AGAM	W4KNW8_9AGAM	W4JR51	W4KNW8	Rad60-SLD_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.425
W4JTU6_9AGAM	W4JP57_9AGAM	W4JTU6	W4JP57	Uncharacterized protein.	UBX domain-containing protein.	0.821
W4JTU6_9AGAM	W4JYS2_9AGAM	W4JTU6	W4JYS2	Uncharacterized protein.	Uncharacterized protein.	0.962
W4JTU6_9AGAM	W4KD08_9AGAM	W4JTU6	W4KD08	Uncharacterized protein.	UBX domain-containing protein.	0.920
W4JTU6_9AGAM	W4KP44_9AGAM	W4JTU6	W4KP44	Uncharacterized protein.	MPN domain-containing protein.	0.819
W4JUZ2_9AGAM	W4JV61_9AGAM	W4JUZ2	W4JV61	Rad60-SLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.900
W4JUZ2_9AGAM	W4JWU7_9AGAM	W4JUZ2	W4JWU7	Rad60-SLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.475
W4JUZ2_9AGAM	W4JYT1_9AGAM	W4JUZ2	W4JYT1	Rad60-SLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.687
W4JUZ2_9AGAM	W4K2X3_9AGAM	W4JUZ2	W4K2X3	Rad60-SLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.475