15 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JPL4_9AGAM	Uncharacterized protein. (681 aa)
	W4JRZ6_9AGAM	FCP1 homology domain-containing protein. (1308 aa)
	W4JUD2_9AGAM	Uncharacterized protein. (299 aa)
	GH61C	Glycosyl hydrolase, family 61, GH61.3. (233 aa)
	W4JW17_9AGAM	Uncharacterized protein. (252 aa)
	GH61A	Glycoside hydrolase family 61 protein. (232 aa)
	W4K1W8_9AGAM	Uncharacterized protein. (2109 aa)
	W4K5W7_9AGAM	Uncharacterized protein. (216 aa)
	W4K945_9AGAM	Uncharacterized protein. (185 aa)
	W4KC32_9AGAM	Uncharacterized protein. (1823 aa)
	W4KD71_9AGAM	Uncharacterized protein. (1986 aa)
	W4KDV0_9AGAM	Uncharacterized protein. (794 aa)
	W4KED6_9AGAM	Lipid transport protein. (778 aa)
	W4KG29_9AGAM	Uncharacterized protein. (1089 aa)
	W4KPX8_9AGAM	Uncharacterized protein. (1370 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GH61A	W4K1W8_9AGAM	W4JX02	W4K1W8	Glycoside hydrolase family 61 protein.	Uncharacterized protein.	0.478
GH61A	W4KC32_9AGAM	W4JX02	W4KC32	Glycoside hydrolase family 61 protein.	Uncharacterized protein.	0.439
GH61C	W4K1W8_9AGAM	W4JUX2	W4K1W8	Glycosyl hydrolase, family 61, GH61.3.	Uncharacterized protein.	0.478
GH61C	W4KC32_9AGAM	W4JUX2	W4KC32	Glycosyl hydrolase, family 61, GH61.3.	Uncharacterized protein.	0.439
W4JPL4_9AGAM	W4K1W8_9AGAM	W4JPL4	W4K1W8	Uncharacterized protein.	Uncharacterized protein.	0.953
W4JPL4_9AGAM	W4K5W7_9AGAM	W4JPL4	W4K5W7	Uncharacterized protein.	Uncharacterized protein.	0.494
W4JPL4_9AGAM	W4K945_9AGAM	W4JPL4	W4K945	Uncharacterized protein.	Uncharacterized protein.	0.494
W4JPL4_9AGAM	W4KC32_9AGAM	W4JPL4	W4KC32	Uncharacterized protein.	Uncharacterized protein.	0.838
W4JPL4_9AGAM	W4KD71_9AGAM	W4JPL4	W4KD71	Uncharacterized protein.	Uncharacterized protein.	0.936
W4JPL4_9AGAM	W4KDV0_9AGAM	W4JPL4	W4KDV0	Uncharacterized protein.	Uncharacterized protein.	0.494
W4JPL4_9AGAM	W4KG29_9AGAM	W4JPL4	W4KG29	Uncharacterized protein.	Uncharacterized protein.	0.721
W4JPL4_9AGAM	W4KPX8_9AGAM	W4JPL4	W4KPX8	Uncharacterized protein.	Uncharacterized protein.	0.828
W4JRZ6_9AGAM	W4KED6_9AGAM	W4JRZ6	W4KED6	FCP1 homology domain-containing protein.	Lipid transport protein.	0.786
W4JUD2_9AGAM	W4KED6_9AGAM	W4JUD2	W4KED6	Uncharacterized protein.	Lipid transport protein.	0.754
W4JW17_9AGAM	W4K1W8_9AGAM	W4JW17	W4K1W8	Uncharacterized protein.	Uncharacterized protein.	0.478
W4JW17_9AGAM	W4KC32_9AGAM	W4JW17	W4KC32	Uncharacterized protein.	Uncharacterized protein.	0.439
W4K1W8_9AGAM	GH61A	W4K1W8	W4JX02	Uncharacterized protein.	Glycoside hydrolase family 61 protein.	0.478
W4K1W8_9AGAM	GH61C	W4K1W8	W4JUX2	Uncharacterized protein.	Glycosyl hydrolase, family 61, GH61.3.	0.478
W4K1W8_9AGAM	W4JPL4_9AGAM	W4K1W8	W4JPL4	Uncharacterized protein.	Uncharacterized protein.	0.953
W4K1W8_9AGAM	W4JW17_9AGAM	W4K1W8	W4JW17	Uncharacterized protein.	Uncharacterized protein.	0.478