17 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JTL8_9AGAM	Uncharacterized protein. (429 aa)
	W4JUT8_9AGAM	RING-type domain-containing protein. (108 aa)
	W4JYT1_9AGAM	Ubiquitin-like domain-containing protein. (159 aa)
	W4JZT6_9AGAM	Uncharacterized protein; Belongs to the actin family. (727 aa)
	W4K1J0_9AGAM	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (638 aa)
	W4K3N4_9AGAM	Uncharacterized protein. (394 aa)
	W4K7T1_9AGAM	Uncharacterized protein. (934 aa)
	W4KA61_9AGAM	Uncharacterized protein. (894 aa)
	W4KGB1_9AGAM	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (473 aa)
	W4KJ47_9AGAM	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (454 aa)
	W4KL83_9AGAM	Uncharacterized protein. (165 aa)
	W4KPV7_9AGAM	YL1_C domain-containing protein. (110 aa)
	W4KPT7_9AGAM	PCI domain-containing protein. (173 aa)
	W4KP72_9AGAM	PCI domain-containing protein. (469 aa)
	W4KP28_9AGAM	MPN domain-containing protein. (322 aa)
	W4KM86_9AGAM	CSN8_PSD8_EIF3K domain-containing protein. (172 aa)
	W4KNQ4_9AGAM	Uncharacterized protein. (1505 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JTL8_9AGAM	W4JUT8_9AGAM	W4JTL8	W4JUT8	Uncharacterized protein.	RING-type domain-containing protein.	0.889
W4JTL8_9AGAM	W4JYT1_9AGAM	W4JTL8	W4JYT1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.673
W4JTL8_9AGAM	W4K3N4_9AGAM	W4JTL8	W4K3N4	Uncharacterized protein.	Uncharacterized protein.	0.668
W4JTL8_9AGAM	W4KGB1_9AGAM	W4JTL8	W4KGB1	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.585
W4JTL8_9AGAM	W4KJ47_9AGAM	W4JTL8	W4KJ47	Uncharacterized protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.753
W4JTL8_9AGAM	W4KM86_9AGAM	W4JTL8	W4KM86	Uncharacterized protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.999
W4JTL8_9AGAM	W4KP28_9AGAM	W4JTL8	W4KP28	Uncharacterized protein.	MPN domain-containing protein.	0.999
W4JTL8_9AGAM	W4KP72_9AGAM	W4JTL8	W4KP72	Uncharacterized protein.	PCI domain-containing protein.	0.999
W4JTL8_9AGAM	W4KPT7_9AGAM	W4JTL8	W4KPT7	Uncharacterized protein.	PCI domain-containing protein.	0.998
W4JUT8_9AGAM	W4JTL8_9AGAM	W4JUT8	W4JTL8	RING-type domain-containing protein.	Uncharacterized protein.	0.889
W4JUT8_9AGAM	W4JYT1_9AGAM	W4JUT8	W4JYT1	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.906
W4JUT8_9AGAM	W4K1J0_9AGAM	W4JUT8	W4K1J0	RING-type domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.556
W4JUT8_9AGAM	W4K3N4_9AGAM	W4JUT8	W4K3N4	RING-type domain-containing protein.	Uncharacterized protein.	0.751
W4JUT8_9AGAM	W4KJ47_9AGAM	W4JUT8	W4KJ47	RING-type domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.874
W4JUT8_9AGAM	W4KL83_9AGAM	W4JUT8	W4KL83	RING-type domain-containing protein.	Uncharacterized protein.	0.658
W4JUT8_9AGAM	W4KM86_9AGAM	W4JUT8	W4KM86	RING-type domain-containing protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.902
W4JUT8_9AGAM	W4KP28_9AGAM	W4JUT8	W4KP28	RING-type domain-containing protein.	MPN domain-containing protein.	0.889
W4JUT8_9AGAM	W4KP72_9AGAM	W4JUT8	W4KP72	RING-type domain-containing protein.	PCI domain-containing protein.	0.939
W4JUT8_9AGAM	W4KPT7_9AGAM	W4JUT8	W4KPT7	RING-type domain-containing protein.	PCI domain-containing protein.	0.848
W4JUT8_9AGAM	W4KPV7_9AGAM	W4JUT8	W4KPV7	RING-type domain-containing protein.	YL1_C domain-containing protein.	0.536