14 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JYT1_9AGAM	Ubiquitin-like domain-containing protein. (159 aa)
	W4K3N4_9AGAM	Uncharacterized protein. (394 aa)
	W4K7S1_9AGAM	CPSF_A domain-containing protein. (1254 aa)
	W4K7T1_9AGAM	Uncharacterized protein. (934 aa)
	W4JNC0_9AGAM	ERCC4 domain-containing protein. (941 aa)
	W4JS47_9AGAM	Uncharacterized protein. (207 aa)
	W4JY75_9AGAM	CULLIN_2 domain-containing protein; Belongs to the cullin family. (810 aa)
	W4KA61_9AGAM	Uncharacterized protein. (894 aa)
	W4KJ47_9AGAM	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (454 aa)
	W4KL83_9AGAM	Uncharacterized protein. (165 aa)
	W4KLF0_9AGAM	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (617 aa)
	W4KM97_9AGAM	Uncharacterized protein. (1100 aa)
	W4KMV4_9AGAM	Uncharacterized protein. (494 aa)
	W4JUT8_9AGAM	RING-type domain-containing protein. (108 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JNC0_9AGAM	W4JS47_9AGAM	W4JNC0	W4JS47	ERCC4 domain-containing protein.	Uncharacterized protein.	0.999
W4JNC0_9AGAM	W4JUT8_9AGAM	W4JNC0	W4JUT8	ERCC4 domain-containing protein.	RING-type domain-containing protein.	0.629
W4JNC0_9AGAM	W4JY75_9AGAM	W4JNC0	W4JY75	ERCC4 domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.712
W4JNC0_9AGAM	W4JYT1_9AGAM	W4JNC0	W4JYT1	ERCC4 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.648
W4JNC0_9AGAM	W4K3N4_9AGAM	W4JNC0	W4K3N4	ERCC4 domain-containing protein.	Uncharacterized protein.	0.648
W4JNC0_9AGAM	W4K7S1_9AGAM	W4JNC0	W4K7S1	ERCC4 domain-containing protein.	CPSF_A domain-containing protein.	0.759
W4JNC0_9AGAM	W4K7T1_9AGAM	W4JNC0	W4K7T1	ERCC4 domain-containing protein.	Uncharacterized protein.	0.590
W4JNC0_9AGAM	W4KA61_9AGAM	W4JNC0	W4KA61	ERCC4 domain-containing protein.	Uncharacterized protein.	0.590
W4JNC0_9AGAM	W4KJ47_9AGAM	W4JNC0	W4KJ47	ERCC4 domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.658
W4JNC0_9AGAM	W4KLF0_9AGAM	W4JNC0	W4KLF0	ERCC4 domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.915
W4JNC0_9AGAM	W4KM97_9AGAM	W4JNC0	W4KM97	ERCC4 domain-containing protein.	Uncharacterized protein.	0.909
W4JS47_9AGAM	W4JNC0_9AGAM	W4JS47	W4JNC0	Uncharacterized protein.	ERCC4 domain-containing protein.	0.999
W4JS47_9AGAM	W4JUT8_9AGAM	W4JS47	W4JUT8	Uncharacterized protein.	RING-type domain-containing protein.	0.628
W4JS47_9AGAM	W4JY75_9AGAM	W4JS47	W4JY75	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.711
W4JS47_9AGAM	W4JYT1_9AGAM	W4JS47	W4JYT1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.676
W4JS47_9AGAM	W4K3N4_9AGAM	W4JS47	W4K3N4	Uncharacterized protein.	Uncharacterized protein.	0.716
W4JS47_9AGAM	W4K7S1_9AGAM	W4JS47	W4K7S1	Uncharacterized protein.	CPSF_A domain-containing protein.	0.802
W4JS47_9AGAM	W4K7T1_9AGAM	W4JS47	W4K7T1	Uncharacterized protein.	Uncharacterized protein.	0.502
W4JS47_9AGAM	W4KA61_9AGAM	W4JS47	W4KA61	Uncharacterized protein.	Uncharacterized protein.	0.502
W4JS47_9AGAM	W4KJ47_9AGAM	W4JS47	W4KJ47	Uncharacterized protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.609