12 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4KDI0_9AGAM	Uncharacterized protein. (361 aa)
	W4KLY3_9AGAM	Uncharacterized protein. (186 aa)
	W4KLB0_9AGAM	CAP-Gly domain-containing protein. (1169 aa)
	W4KD09_9AGAM	Uncharacterized protein. (561 aa)
	W4K7T8_9AGAM	Uncharacterized protein. (550 aa)
	W4K518_9AGAM	Uncharacterized protein. (390 aa)
	W4K3Y4_9AGAM	Lysophospholipase. (716 aa)
	W4JT74_9AGAM	Uncharacterized protein. (202 aa)
	W4JQA1_9AGAM	Amino_oxidase domain-containing protein. (548 aa)
	W4JPP0_9AGAM	Amino_oxidase domain-containing protein. (301 aa)
	W4JNJ5_9AGAM	Uncharacterized protein. (182 aa)
	W4JMT0_9AGAM	Uncharacterized protein. (188 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JMT0_9AGAM	W4K518_9AGAM	W4JMT0	W4K518	Uncharacterized protein.	Uncharacterized protein.	0.990
W4JMT0_9AGAM	W4K7T8_9AGAM	W4JMT0	W4K7T8	Uncharacterized protein.	Uncharacterized protein.	0.999
W4JMT0_9AGAM	W4KD09_9AGAM	W4JMT0	W4KD09	Uncharacterized protein.	Uncharacterized protein.	0.765
W4JMT0_9AGAM	W4KLB0_9AGAM	W4JMT0	W4KLB0	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.967
W4JMT0_9AGAM	W4KLY3_9AGAM	W4JMT0	W4KLY3	Uncharacterized protein.	Uncharacterized protein.	0.998
W4JNJ5_9AGAM	W4K518_9AGAM	W4JNJ5	W4K518	Uncharacterized protein.	Uncharacterized protein.	0.675
W4JNJ5_9AGAM	W4K7T8_9AGAM	W4JNJ5	W4K7T8	Uncharacterized protein.	Uncharacterized protein.	0.415
W4JNJ5_9AGAM	W4KD09_9AGAM	W4JNJ5	W4KD09	Uncharacterized protein.	Uncharacterized protein.	0.484
W4JNJ5_9AGAM	W4KDI0_9AGAM	W4JNJ5	W4KDI0	Uncharacterized protein.	Uncharacterized protein.	0.653
W4JNJ5_9AGAM	W4KLB0_9AGAM	W4JNJ5	W4KLB0	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.643
W4JPP0_9AGAM	W4K518_9AGAM	W4JPP0	W4K518	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.675
W4JPP0_9AGAM	W4K7T8_9AGAM	W4JPP0	W4K7T8	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.415
W4JPP0_9AGAM	W4KD09_9AGAM	W4JPP0	W4KD09	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.484
W4JPP0_9AGAM	W4KDI0_9AGAM	W4JPP0	W4KDI0	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.653
W4JPP0_9AGAM	W4KLB0_9AGAM	W4JPP0	W4KLB0	Amino_oxidase domain-containing protein.	CAP-Gly domain-containing protein.	0.643
W4JQA1_9AGAM	W4K518_9AGAM	W4JQA1	W4K518	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.675
W4JQA1_9AGAM	W4K7T8_9AGAM	W4JQA1	W4K7T8	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.415
W4JQA1_9AGAM	W4KD09_9AGAM	W4JQA1	W4KD09	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.484
W4JQA1_9AGAM	W4KDI0_9AGAM	W4JQA1	W4KDI0	Amino_oxidase domain-containing protein.	Uncharacterized protein.	0.653
W4JQA1_9AGAM	W4KLB0_9AGAM	W4JQA1	W4KLB0	Amino_oxidase domain-containing protein.	CAP-Gly domain-containing protein.	0.643