48 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JYE7_9AGAM	Uncharacterized protein. (170 aa)
	W4JVA1_9AGAM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
	W4JUR4_9AGAM	TAFII28 domain-containing protein. (106 aa)
	W4JRB6_9AGAM	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
	W4JR14_9AGAM	Uncharacterized protein. (64 aa)
	W4JWQ7_9AGAM	RNA_pol_L_2 domain-containing protein. (139 aa)
	W4JXW4_9AGAM	HTH TFE/IIEalpha-type domain-containing protein. (511 aa)
	W4JY63_9AGAM	Uncharacterized protein. (75 aa)
	W4JVD7_9AGAM	TFIIB-type domain-containing protein. (337 aa)
	W4KQT6_9AGAM	Uncharacterized protein. (786 aa)
	W4KQF1_9AGAM	Uncharacterized protein. (741 aa)
	W4KQ64_9AGAM	PHD-type domain-containing protein. (830 aa)
	W4KPS6_9AGAM	Uncharacterized protein. (102 aa)
	W4KPN5_9AGAM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1732 aa)
	W4KNW5_9AGAM	DUF3591 domain-containing protein. (706 aa)
	W4KNS5_9AGAM	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1231 aa)
	W4KNA9_9AGAM	CYCLIN domain-containing protein; Belongs to the cyclin family. (342 aa)
	W4KMB2_9AGAM	Uncharacterized protein. (1763 aa)
	W4KM57_9AGAM	Uncharacterized protein. (163 aa)
	W4KLZ8_9AGAM	TAFII55_N domain-containing protein. (535 aa)
	W4KLG9_9AGAM	DUF4211 domain-containing protein. (461 aa)
	W4KKL9_9AGAM	Uncharacterized protein. (93 aa)
	W4KJP7_9AGAM	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (689 aa)
	W4KJ92_9AGAM	Helicase ATP-binding domain-containing protein. (1328 aa)
	W4KIL6_9AGAM	RING-type domain-containing protein. (396 aa)
	W4KHN1_9AGAM	Uncharacterized protein. (189 aa)
	W4KH04_9AGAM	Uncharacterized protein. (62 aa)
	W4KGV0_9AGAM	Uncharacterized protein. (119 aa)
	W4KEK3_9AGAM	TFIIF_beta domain-containing protein. (229 aa)
	W4KD96_9AGAM	TAF4 domain-containing protein. (394 aa)
	W4KD38_9AGAM	Uncharacterized protein. (137 aa)
	W4KCT1_9AGAM	TFIIB-type domain-containing protein. (349 aa)
	W4KAV6_9AGAM	Uncharacterized protein. (208 aa)
	W4KAQ6_9AGAM	Uncharacterized protein. (858 aa)
	W4KAI4_9AGAM	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (473 aa)
	W4K6L1_9AGAM	TAF domain-containing protein. (463 aa)
	W4K6A4_9AGAM	Uncharacterized protein. (346 aa)
	W4K5S7_9AGAM	VWFA domain-containing protein. (397 aa)
	W4K5F5_9AGAM	BSD domain-containing protein. (593 aa)
	W4K4G5_9AGAM	Uncharacterized protein. (290 aa)
	W4K4A8_9AGAM	TFIID_20kDa domain-containing protein. (326 aa)
	W4K3P5_9AGAM	RPOLD domain-containing protein. (397 aa)
	W4K2F3_9AGAM	WD_REPEATS_REGION domain-containing protein. (192 aa)
	W4K2C5_9AGAM	BTP domain-containing protein. (549 aa)
	W4K254_9AGAM	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
	W4K1H3_9AGAM	RPOL4c domain-containing protein. (134 aa)
	W4K003_9AGAM	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (365 aa)
	W4K059_9AGAM	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (164 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JR14_9AGAM	W4JRB6_9AGAM	W4JR14	W4JRB6	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.784
W4JR14_9AGAM	W4JVA1_9AGAM	W4JR14	W4JVA1	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.786
W4JR14_9AGAM	W4JVD7_9AGAM	W4JR14	W4JVD7	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.743
W4JR14_9AGAM	W4JWQ7_9AGAM	W4JR14	W4JWQ7	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.784
W4JR14_9AGAM	W4JXW4_9AGAM	W4JR14	W4JXW4	Uncharacterized protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.994
W4JR14_9AGAM	W4JY63_9AGAM	W4JR14	W4JY63	Uncharacterized protein.	Uncharacterized protein.	0.798
W4JR14_9AGAM	W4JYE7_9AGAM	W4JR14	W4JYE7	Uncharacterized protein.	Uncharacterized protein.	0.784
W4JR14_9AGAM	W4K003_9AGAM	W4JR14	W4K003	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.779
W4JR14_9AGAM	W4K1H3_9AGAM	W4JR14	W4K1H3	Uncharacterized protein.	RPOL4c domain-containing protein.	0.791
W4JR14_9AGAM	W4K254_9AGAM	W4JR14	W4K254	Uncharacterized protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.994
W4JR14_9AGAM	W4K3P5_9AGAM	W4JR14	W4K3P5	Uncharacterized protein.	RPOLD domain-containing protein.	0.784
W4JR14_9AGAM	W4K4G5_9AGAM	W4JR14	W4K4G5	Uncharacterized protein.	Uncharacterized protein.	0.784
W4JR14_9AGAM	W4K5F5_9AGAM	W4JR14	W4K5F5	Uncharacterized protein.	BSD domain-containing protein.	0.988
W4JR14_9AGAM	W4K5S7_9AGAM	W4JR14	W4K5S7	Uncharacterized protein.	VWFA domain-containing protein.	0.992
W4JR14_9AGAM	W4K6A4_9AGAM	W4JR14	W4K6A4	Uncharacterized protein.	Uncharacterized protein.	0.995
W4JR14_9AGAM	W4KAI4_9AGAM	W4JR14	W4KAI4	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.999
W4JR14_9AGAM	W4KAQ6_9AGAM	W4JR14	W4KAQ6	Uncharacterized protein.	Uncharacterized protein.	0.991
W4JR14_9AGAM	W4KAV6_9AGAM	W4JR14	W4KAV6	Uncharacterized protein.	Uncharacterized protein.	0.784
W4JR14_9AGAM	W4KCT1_9AGAM	W4JR14	W4KCT1	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.743
W4JR14_9AGAM	W4KD38_9AGAM	W4JR14	W4KD38	Uncharacterized protein.	Uncharacterized protein.	0.680