30 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4KPN5_9AGAM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1732 aa)
	W4KAI4_9AGAM	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (473 aa)
	W4K6A4_9AGAM	Uncharacterized protein. (346 aa)
	W4K5S7_9AGAM	VWFA domain-containing protein. (397 aa)
	W4K5F5_9AGAM	BSD domain-containing protein. (593 aa)
	W4K3P5_9AGAM	RPOLD domain-containing protein. (397 aa)
	W4K1H3_9AGAM	RPOL4c domain-containing protein. (134 aa)
	W4K003_9AGAM	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (365 aa)
	W4KJ92_9AGAM	Helicase ATP-binding domain-containing protein. (1328 aa)
	W4KJP7_9AGAM	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (689 aa)
	W4KLP0_9AGAM	Uncharacterized protein. (343 aa)
	W4KM57_9AGAM	Uncharacterized protein. (163 aa)
	W4KNA9_9AGAM	CYCLIN domain-containing protein; Belongs to the cyclin family. (342 aa)
	W4KNS5_9AGAM	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1231 aa)
	W4KAQ6_9AGAM	Uncharacterized protein. (858 aa)
	W4KPS6_9AGAM	Uncharacterized protein. (102 aa)
	W4JM27_9AGAM	Uncharacterized protein. (397 aa)
	W4JYE7_9AGAM	Uncharacterized protein. (170 aa)
	W4JY63_9AGAM	Uncharacterized protein. (75 aa)
	W4JWQ7_9AGAM	RNA_pol_L_2 domain-containing protein. (139 aa)
	W4JVD9_9AGAM	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1123 aa)
	W4JVA1_9AGAM	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (132 aa)
	W4JR14_9AGAM	Uncharacterized protein. (64 aa)
	W4JPT0_9AGAM	Spt5-NGN domain-containing protein. (312 aa)
	W4KIL6_9AGAM	RING-type domain-containing protein. (396 aa)
	W4KHX0_9AGAM	mRNA cap guanine-N7 methyltransferase. (556 aa)
	W4KH04_9AGAM	Uncharacterized protein. (62 aa)
	W4KEK3_9AGAM	TFIIF_beta domain-containing protein. (229 aa)
	W4KD38_9AGAM	Uncharacterized protein. (137 aa)
	W4KAV6_9AGAM	Uncharacterized protein. (208 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JM27_9AGAM	W4JVA1_9AGAM	W4JM27	W4JVA1	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.891
W4JM27_9AGAM	W4JWQ7_9AGAM	W4JM27	W4JWQ7	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.880
W4JM27_9AGAM	W4JY63_9AGAM	W4JM27	W4JY63	Uncharacterized protein.	Uncharacterized protein.	0.883
W4JM27_9AGAM	W4JYE7_9AGAM	W4JM27	W4JYE7	Uncharacterized protein.	Uncharacterized protein.	0.906
W4JM27_9AGAM	W4K003_9AGAM	W4JM27	W4K003	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.727
W4JM27_9AGAM	W4K1H3_9AGAM	W4JM27	W4K1H3	Uncharacterized protein.	RPOL4c domain-containing protein.	0.906
W4JM27_9AGAM	W4K3P5_9AGAM	W4JM27	W4K3P5	Uncharacterized protein.	RPOLD domain-containing protein.	0.906
W4JM27_9AGAM	W4K5F5_9AGAM	W4JM27	W4K5F5	Uncharacterized protein.	BSD domain-containing protein.	0.673
W4JM27_9AGAM	W4K6A4_9AGAM	W4JM27	W4K6A4	Uncharacterized protein.	Uncharacterized protein.	0.607
W4JM27_9AGAM	W4KAI4_9AGAM	W4JM27	W4KAI4	Uncharacterized protein.	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.639
W4JM27_9AGAM	W4KAV6_9AGAM	W4JM27	W4KAV6	Uncharacterized protein.	Uncharacterized protein.	0.906
W4JM27_9AGAM	W4KD38_9AGAM	W4JM27	W4KD38	Uncharacterized protein.	Uncharacterized protein.	0.779
W4JM27_9AGAM	W4KEK3_9AGAM	W4JM27	W4KEK3	Uncharacterized protein.	TFIIF_beta domain-containing protein.	0.799
W4JM27_9AGAM	W4KH04_9AGAM	W4JM27	W4KH04	Uncharacterized protein.	Uncharacterized protein.	0.880
W4JM27_9AGAM	W4KHX0_9AGAM	W4JM27	W4KHX0	Uncharacterized protein.	mRNA cap guanine-N7 methyltransferase.	0.712
W4JM27_9AGAM	W4KIL6_9AGAM	W4JM27	W4KIL6	Uncharacterized protein.	RING-type domain-containing protein.	0.617
W4JM27_9AGAM	W4KJP7_9AGAM	W4JM27	W4KJP7	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.634
W4JM27_9AGAM	W4KLP0_9AGAM	W4JM27	W4KLP0	Uncharacterized protein.	Uncharacterized protein.	0.813
W4JM27_9AGAM	W4KM57_9AGAM	W4JM27	W4KM57	Uncharacterized protein.	Uncharacterized protein.	0.889
W4JM27_9AGAM	W4KNA9_9AGAM	W4JM27	W4KNA9	Uncharacterized protein.	CYCLIN domain-containing protein; Belongs to the cyclin family.	0.676