53 items (Heterobasidion irregulare) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	W4JMI9_9AGAM	WD_REPEATS_REGION domain-containing protein. (379 aa)
	W4JP70_9AGAM	Uncharacterized protein. (676 aa)
	W4JQG4_9AGAM	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (93 aa)
	W4JR22_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)
	W4JTZ7_9AGAM	WD_REPEATS_REGION domain-containing protein. (410 aa)
	W4JUH8_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	W4JUT8_9AGAM	RING-type domain-containing protein. (108 aa)
	W4JV28_9AGAM	WD_REPEATS_REGION domain-containing protein. (288 aa)
	W4JY75_9AGAM	CULLIN_2 domain-containing protein; Belongs to the cullin family. (810 aa)
	W4JYK3_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	W4JYT1_9AGAM	Ubiquitin-like domain-containing protein. (159 aa)
	W4JZV2_9AGAM	HECT domain-containing protein. (2537 aa)
	W4K0D9_9AGAM	Uncharacterized protein. (689 aa)
	W4K1C3_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	W4K1F3_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein. (174 aa)
	W4K1V4_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (178 aa)
	W4K259_9AGAM	APC1_C domain-containing protein. (1947 aa)
	W4K3T3_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (173 aa)
	W4K3V1_9AGAM	WD_REPEATS_REGION domain-containing protein. (348 aa)
	W4K4E5_9AGAM	RING-type domain-containing protein. (384 aa)
	W4K4N6_9AGAM	WD_REPEATS_REGION domain-containing protein. (484 aa)
	W4K5V5_9AGAM	Uncharacterized protein. (3677 aa)
	W4K5W5_9AGAM	TPR_REGION domain-containing protein. (609 aa)
	W4K653_9AGAM	HECT domain-containing protein. (955 aa)
	W4K798_9AGAM	U-box domain-containing protein. (1103 aa)
	W4K7L5_9AGAM	CULLIN_2 domain-containing protein; Belongs to the cullin family. (763 aa)
	W4K7Q8_9AGAM	ThiF domain-containing protein. (341 aa)
	W4K7S1_9AGAM	CPSF_A domain-containing protein. (1254 aa)
	W4KA53_9AGAM	CULLIN_2 domain-containing protein; Belongs to the cullin family. (745 aa)
	W4KB23_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (221 aa)
	W4KB50_9AGAM	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (206 aa)
	W4KB99_9AGAM	CULLIN_2 domain-containing protein; Belongs to the cullin family. (733 aa)
	W4KBM6_9AGAM	TPR_REGION domain-containing protein. (654 aa)
	W4KDL0_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
	W4KDL1_9AGAM	F-box domain-containing protein. (557 aa)
	W4KFM7_9AGAM	UBA_e1_C domain-containing protein. (1010 aa)
	W4KHY6_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein. (417 aa)
	W4KIC6_9AGAM	E3 ubiquitin-protein ligase. (845 aa)
	W4KIH2_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)
	W4KJK7_9AGAM	TPR_REGION domain-containing protein. (803 aa)
	W4KJV4_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	W4KKD6_9AGAM	Uncharacterized protein. (728 aa)
	W4KKH6_9AGAM	Uncharacterized protein. (889 aa)
	W4KKU2_9AGAM	Uncharacterized protein; Belongs to the SKP1 family. (160 aa)
	W4KLY1_9AGAM	E2_bind domain-containing protein. (434 aa)
	W4KM48_9AGAM	Uncharacterized protein. (685 aa)
	ubc3	Ubiquitin-conjugating enzyme3 like-protein. (944 aa)
	W4KNI5_9AGAM	Uncharacterized protein. (519 aa)
	W4KNW8_9AGAM	Ubiquitin-like domain-containing protein. (128 aa)
	W4KPL1_9AGAM	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (178 aa)
	ubc2	Ubiquitin-conjugating enzyme2. (153 aa)
	W4KPU2_9AGAM	RING-type domain-containing protein. (103 aa)
	W4KRA0_9AGAM	Uncharacterized protein. (505 aa)

Your Current Organism:

Heterobasidion irregulare

NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4JMI9_9AGAM	W4JR22_9AGAM	W4JMI9	W4JR22	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.411
W4JMI9_9AGAM	W4JTZ7_9AGAM	W4JMI9	W4JTZ7	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.903
W4JMI9_9AGAM	W4JYK3_9AGAM	W4JMI9	W4JYK3	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.659
W4JMI9_9AGAM	W4JYT1_9AGAM	W4JMI9	W4JYT1	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.577
W4JMI9_9AGAM	W4K1C3_9AGAM	W4JMI9	W4K1C3	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.797
W4JMI9_9AGAM	W4K259_9AGAM	W4JMI9	W4K259	WD_REPEATS_REGION domain-containing protein.	APC1_C domain-containing protein.	0.993
W4JMI9_9AGAM	W4K3V1_9AGAM	W4JMI9	W4K3V1	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.900
W4JMI9_9AGAM	W4K4N6_9AGAM	W4JMI9	W4K4N6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.900
W4JMI9_9AGAM	W4K5W5_9AGAM	W4JMI9	W4K5W5	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.983
W4JMI9_9AGAM	W4K7L5_9AGAM	W4JMI9	W4K7L5	WD_REPEATS_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.425
W4JMI9_9AGAM	W4KA53_9AGAM	W4JMI9	W4KA53	WD_REPEATS_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.992
W4JMI9_9AGAM	W4KB50_9AGAM	W4JMI9	W4KB50	WD_REPEATS_REGION domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.993
W4JMI9_9AGAM	W4KB99_9AGAM	W4JMI9	W4KB99	WD_REPEATS_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.425
W4JMI9_9AGAM	W4KBM6_9AGAM	W4JMI9	W4KBM6	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.994
W4JMI9_9AGAM	W4KIH2_9AGAM	W4JMI9	W4KIH2	WD_REPEATS_REGION domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.906
W4JMI9_9AGAM	W4KJK7_9AGAM	W4JMI9	W4KJK7	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.995
W4JMI9_9AGAM	W4KKU2_9AGAM	W4JMI9	W4KKU2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the SKP1 family.	0.529
W4JMI9_9AGAM	W4KNW8_9AGAM	W4JMI9	W4KNW8	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.411
W4JMI9_9AGAM	W4KPU2_9AGAM	W4JMI9	W4KPU2	WD_REPEATS_REGION domain-containing protein.	RING-type domain-containing protein.	0.988
W4JP70_9AGAM	W4JR22_9AGAM	W4JP70	W4JR22	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.461