12 items (Melampsora laricipopulina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4R6B6_MELLP	Uncharacterized protein. (448 aa)
	F4R9C0_MELLP	Bromo domain-containing protein. (744 aa)
	F4RCI4_MELLP	Uncharacterized protein. (393 aa)
	F4RCT5_MELLP	Uncharacterized protein. (676 aa)
	F4RF45_MELLP	Uncharacterized protein. (355 aa)
	SUS1	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (129 aa)
	F4RJM2_MELLP	SCA7 domain-containing protein. (474 aa)
	F4RK62_MELLP	SGF29 C-terminal domain-containing protein. (323 aa)
	F4RTR0_MELLP	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. (450 aa)
	F4S1Y3_MELLP	Uncharacterized protein. (454 aa)
	F4S3L2_MELLP	WD_REPEATS_REGION domain-containing protein. (676 aa)
	F4S857_MELLP	FATC domain-containing protein. (563 aa)

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4R6B6_MELLP	F4R9C0_MELLP	F4R6B6	F4R9C0	Uncharacterized protein.	Bromo domain-containing protein.	0.833
F4R6B6_MELLP	F4RCI4_MELLP	F4R6B6	F4RCI4	Uncharacterized protein.	Uncharacterized protein.	0.594
F4R6B6_MELLP	F4RCT5_MELLP	F4R6B6	F4RCT5	Uncharacterized protein.	Uncharacterized protein.	0.765
F4R6B6_MELLP	F4RF45_MELLP	F4R6B6	F4RF45	Uncharacterized protein.	Uncharacterized protein.	0.886
F4R6B6_MELLP	F4RJM2_MELLP	F4R6B6	F4RJM2	Uncharacterized protein.	SCA7 domain-containing protein.	0.871
F4R6B6_MELLP	F4RK62_MELLP	F4R6B6	F4RK62	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.836
F4R6B6_MELLP	F4RTR0_MELLP	F4R6B6	F4RTR0	Uncharacterized protein.	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family.	0.880
F4R6B6_MELLP	F4S1Y3_MELLP	F4R6B6	F4S1Y3	Uncharacterized protein.	Uncharacterized protein.	0.887
F4R6B6_MELLP	F4S3L2_MELLP	F4R6B6	F4S3L2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.569
F4R6B6_MELLP	F4S857_MELLP	F4R6B6	F4S857	Uncharacterized protein.	FATC domain-containing protein.	0.904
F4R6B6_MELLP	SUS1	F4R6B6	F4RIX0	Uncharacterized protein.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.828
F4R9C0_MELLP	F4R6B6_MELLP	F4R9C0	F4R6B6	Bromo domain-containing protein.	Uncharacterized protein.	0.833
F4R9C0_MELLP	F4RCI4_MELLP	F4R9C0	F4RCI4	Bromo domain-containing protein.	Uncharacterized protein.	0.959
F4R9C0_MELLP	F4RCT5_MELLP	F4R9C0	F4RCT5	Bromo domain-containing protein.	Uncharacterized protein.	0.996
F4R9C0_MELLP	F4RF45_MELLP	F4R9C0	F4RF45	Bromo domain-containing protein.	Uncharacterized protein.	0.986
F4R9C0_MELLP	F4RJM2_MELLP	F4R9C0	F4RJM2	Bromo domain-containing protein.	SCA7 domain-containing protein.	0.998
F4R9C0_MELLP	F4RK62_MELLP	F4R9C0	F4RK62	Bromo domain-containing protein.	SGF29 C-terminal domain-containing protein.	0.990
F4R9C0_MELLP	F4RTR0_MELLP	F4R9C0	F4RTR0	Bromo domain-containing protein.	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family.	0.996
F4R9C0_MELLP	F4S1Y3_MELLP	F4R9C0	F4S1Y3	Bromo domain-containing protein.	Uncharacterized protein.	0.961
F4R9C0_MELLP	F4S3L2_MELLP	F4R9C0	F4S3L2	Bromo domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991