(8 nodes) Mixed, incl. 5S rRNA binding, and Translation elongation factor EF1B/ribosomal protein S6 network (Melampsora laricipopulina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4R7E9_MELLP	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family. (326 aa)
	F4R881_MELLP	Ribosomal_L18_c domain-containing protein. (297 aa)
	F4RDP9_MELLP	Uncharacterized protein. (83 aa)
	F4RKM3_MELLP	Uncharacterized protein. (151 aa)
	F4RU36_MELLP	Uncharacterized protein. (124 aa)
	F4S214_MELLP	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (158 aa)
	F4S2R7_MELLP	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (99 aa)
	F4S2S1_MELLP	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (471 aa)

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4R7E9_MELLP	F4R881_MELLP	F4R7E9	F4R881	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal_L18_c domain-containing protein.	0.999
F4R7E9_MELLP	F4RDP9_MELLP	F4R7E9	F4RDP9	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Uncharacterized protein.	0.999
F4R7E9_MELLP	F4RKM3_MELLP	F4R7E9	F4RKM3	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Uncharacterized protein.	0.999
F4R7E9_MELLP	F4RU36_MELLP	F4R7E9	F4RU36	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Uncharacterized protein.	0.999
F4R7E9_MELLP	F4S214_MELLP	F4R7E9	F4S214	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
F4R7E9_MELLP	F4S2R7_MELLP	F4R7E9	F4S2R7	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
F4R7E9_MELLP	F4S2S1_MELLP	F4R7E9	F4S2S1	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.999
F4R881_MELLP	F4R7E9_MELLP	F4R881	F4R7E9	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
F4R881_MELLP	F4RDP9_MELLP	F4R881	F4RDP9	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.999
F4R881_MELLP	F4RKM3_MELLP	F4R881	F4RKM3	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.999
F4R881_MELLP	F4RU36_MELLP	F4R881	F4RU36	Ribosomal_L18_c domain-containing protein.	Uncharacterized protein.	0.999
F4R881_MELLP	F4S214_MELLP	F4R881	F4S214	Ribosomal_L18_c domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
F4R881_MELLP	F4S2R7_MELLP	F4R881	F4S2R7	Ribosomal_L18_c domain-containing protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
F4R881_MELLP	F4S2S1_MELLP	F4R881	F4S2S1	Ribosomal_L18_c domain-containing protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.999
F4RDP9_MELLP	F4R7E9_MELLP	F4RDP9	F4R7E9	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
F4RDP9_MELLP	F4R881_MELLP	F4RDP9	F4R881	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.999
F4RDP9_MELLP	F4RKM3_MELLP	F4RDP9	F4RKM3	Uncharacterized protein.	Uncharacterized protein.	0.999
F4RDP9_MELLP	F4RU36_MELLP	F4RDP9	F4RU36	Uncharacterized protein.	Uncharacterized protein.	0.999
F4RDP9_MELLP	F4S214_MELLP	F4RDP9	F4S214	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.999
F4RDP9_MELLP	F4S2R7_MELLP	F4RDP9	F4S2R7	Uncharacterized protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999