21 items (Melampsora laricipopulina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	F4R509_MELLP	Transcription initiation factor TFIID subunit 9. (216 aa)
	F4R722_MELLP	zf-C2HC5 domain-containing protein. (524 aa)
	F4R9B5_MELLP	CBFD_NFYB_HMF domain-containing protein. (94 aa)
	F4RCT5_MELLP	Uncharacterized protein. (676 aa)
	F4RD40_MELLP	TAF domain-containing protein. (562 aa)
	F4RDR3_MELLP	Acyl_transf_3 domain-containing protein. (488 aa)
	F4RFS7_MELLP	Bromo domain-containing protein. (667 aa)
	SUS1	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (129 aa)
	F4RJG7_MELLP	Uncharacterized protein. (101 aa)
	F4RP29_MELLP	UCR_hinge domain-containing protein. (120 aa)
	F4RQ77_MELLP	Uncharacterized protein. (286 aa)
	F4RU01_MELLP	TAFII28 domain-containing protein. (227 aa)
	F4RUC3_MELLP	Acyl_transf_3 domain-containing protein. (492 aa)
	F4RW68_MELLP	Acyl_transf_3 domain-containing protein. (473 aa)
	F4S1Y3_MELLP	Uncharacterized protein. (454 aa)
	F4S221_MELLP	Acyl_transf_3 domain-containing protein. (431 aa)
	MED6	Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (344 aa)
	F4S5N3_MELLP	Uncharacterized protein. (246 aa)
	F4S7W4_MELLP	Med12 domain-containing protein. (1895 aa)
	F4S7X9_MELLP	Uncharacterized protein. (226 aa)
	F4S8Z1_MELLP	Uncharacterized protein. (287 aa)

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4R509_MELLP	F4RCT5_MELLP	F4R509	F4RCT5	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.994
F4R509_MELLP	F4RD40_MELLP	F4R509	F4RD40	Transcription initiation factor TFIID subunit 9.	TAF domain-containing protein.	0.998
F4R509_MELLP	F4RDR3_MELLP	F4R509	F4RDR3	Transcription initiation factor TFIID subunit 9.	Acyl_transf_3 domain-containing protein.	0.891
F4R509_MELLP	F4RU01_MELLP	F4R509	F4RU01	Transcription initiation factor TFIID subunit 9.	TAFII28 domain-containing protein.	0.941
F4R509_MELLP	F4RUC3_MELLP	F4R509	F4RUC3	Transcription initiation factor TFIID subunit 9.	Acyl_transf_3 domain-containing protein.	0.891
F4R509_MELLP	F4RW68_MELLP	F4R509	F4RW68	Transcription initiation factor TFIID subunit 9.	Acyl_transf_3 domain-containing protein.	0.941
F4R509_MELLP	F4S1Y3_MELLP	F4R509	F4S1Y3	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.997
F4R509_MELLP	F4S221_MELLP	F4R509	F4S221	Transcription initiation factor TFIID subunit 9.	Acyl_transf_3 domain-containing protein.	0.941
F4R509_MELLP	F4S8Z1_MELLP	F4R509	F4S8Z1	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.930
F4R509_MELLP	MED6	F4R509	F4S573	Transcription initiation factor TFIID subunit 9.	Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.	0.564
F4R509_MELLP	SUS1	F4R509	F4RIX0	Transcription initiation factor TFIID subunit 9.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.964
F4RCT5_MELLP	F4R509_MELLP	F4RCT5	F4R509	Uncharacterized protein.	Transcription initiation factor TFIID subunit 9.	0.994
F4RCT5_MELLP	F4RD40_MELLP	F4RCT5	F4RD40	Uncharacterized protein.	TAF domain-containing protein.	0.995
F4RCT5_MELLP	F4S1Y3_MELLP	F4RCT5	F4S1Y3	Uncharacterized protein.	Uncharacterized protein.	0.789
F4RCT5_MELLP	F4S8Z1_MELLP	F4RCT5	F4S8Z1	Uncharacterized protein.	Uncharacterized protein.	0.871
F4RCT5_MELLP	SUS1	F4RCT5	F4RIX0	Uncharacterized protein.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.960
F4RD40_MELLP	F4R509_MELLP	F4RD40	F4R509	TAF domain-containing protein.	Transcription initiation factor TFIID subunit 9.	0.998
F4RD40_MELLP	F4RCT5_MELLP	F4RD40	F4RCT5	TAF domain-containing protein.	Uncharacterized protein.	0.995
F4RD40_MELLP	F4RDR3_MELLP	F4RD40	F4RDR3	TAF domain-containing protein.	Acyl_transf_3 domain-containing protein.	0.890
F4RD40_MELLP	F4RU01_MELLP	F4RD40	F4RU01	TAF domain-containing protein.	TAFII28 domain-containing protein.	0.961