44 items (Melampsora laricipopulina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4S9D3_MELLP	Fe2OG dioxygenase domain-containing protein. (128 aa)
	F4R5U0_MELLP	Uncharacterized protein. (122 aa)
	F4R6H9_MELLP	Uncharacterized protein. (500 aa)
	F4R7K0_MELLP	JmjC domain-containing protein. (1412 aa)
	F4R8H1_MELLP	JmjC domain-containing protein. (405 aa)
	F4R926_MELLP	Fe2OG dioxygenase domain-containing protein. (565 aa)
	F4R949_MELLP	Uncharacterized protein. (291 aa)
	F4R9U8_MELLP	Uncharacterized protein. (1174 aa)
	F4RAV1_MELLP	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (363 aa)
	F4RE31_MELLP	JmjC domain-containing protein. (156 aa)
	F4RF20_MELLP	JmjC domain-containing protein. (65 aa)
	F4RFM6_MELLP	JmjC domain-containing protein. (680 aa)
	F4RIY4_MELLP	TauD domain-containing protein. (367 aa)
	F4RKJ1_MELLP	Uncharacterized protein. (291 aa)
	F4RMS6_MELLP	Uncharacterized protein. (325 aa)
	F4RMS7_MELLP	Uncharacterized protein. (832 aa)
	F4RMV7_MELLP	Uncharacterized protein. (1083 aa)
	F4RN93_MELLP	Uncharacterized protein. (414 aa)
	BNA1	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate. (178 aa)
	F4RP04_MELLP	LigB domain-containing protein. (319 aa)
	F4RPW9_MELLP	JmjC domain-containing protein. (397 aa)
	F4RQ29_MELLP	Fe2OG dioxygenase domain-containing protein. (270 aa)
	F4RQ30_MELLP	Uncharacterized protein. (287 aa)
	F4RRU1_MELLP	Uncharacterized protein. (242 aa)
	F4RTG2_MELLP	JmjC domain-containing protein. (1252 aa)
	F4RVI4_MELLP	JmjC domain-containing protein. (278 aa)
	F4RWY5_MELLP	JmjC domain-containing protein. (486 aa)
	F4RZ35_MELLP	JmjC domain-containing protein. (194 aa)
	F4RZ36_MELLP	JmjN domain-containing protein. (105 aa)
	F4RZ38_MELLP	Uncharacterized protein. (497 aa)
	F4RZ51_MELLP	Uncharacterized protein. (491 aa)
	F4RZW0_MELLP	TauD domain-containing protein. (577 aa)
	F4S1Z1_MELLP	Fe2OG dioxygenase domain-containing protein. (298 aa)
	F4S3P7_MELLP	Fe2OG dioxygenase domain-containing protein. (552 aa)
	F4S490_MELLP	JmjC domain-containing protein. (230 aa)
	F4S4I6_MELLP	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (291 aa)
	F4S5L7_MELLP	Uncharacterized protein. (158 aa)
	F4S608_MELLP	Uncharacterized protein. (610 aa)
	F4S6S6_MELLP	JmjC domain-containing protein. (724 aa)
	F4S8B2_MELLP	Uncharacterized protein. (319 aa)
	ADI1	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (183 aa)
	F4S9S7_MELLP	JmjC domain-containing protein. (128 aa)
	F4SB91_MELLP	JmjC domain-containing protein. (69 aa)
	F4SEC8_MELLP	Uncharacterized protein. (108 aa)

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADI1	F4S5L7_MELLP	F4S9N3	F4S5L7	1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).	Uncharacterized protein.	0.901
BNA1	F4RZ38_MELLP	F4RNL2	F4RZ38	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.	Uncharacterized protein.	0.503
BNA1	F4RZ51_MELLP	F4RNL2	F4RZ51	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.	Uncharacterized protein.	0.503
F4R5U0_MELLP	F4RVI4_MELLP	F4R5U0	F4RVI4	Uncharacterized protein.	JmjC domain-containing protein.	0.414
F4R5U0_MELLP	F4RZ35_MELLP	F4R5U0	F4RZ35	Uncharacterized protein.	JmjC domain-containing protein.	0.588
F4R5U0_MELLP	F4RZ36_MELLP	F4R5U0	F4RZ36	Uncharacterized protein.	JmjN domain-containing protein.	0.588
F4R5U0_MELLP	F4S3P7_MELLP	F4R5U0	F4S3P7	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.603
F4R926_MELLP	F4RPW9_MELLP	F4R926	F4RPW9	Fe2OG dioxygenase domain-containing protein.	JmjC domain-containing protein.	0.459
F4R9U8_MELLP	F4RMV7_MELLP	F4R9U8	F4RMV7	Uncharacterized protein.	Uncharacterized protein.	0.902
F4RF20_MELLP	F4RVI4_MELLP	F4RF20	F4RVI4	JmjC domain-containing protein.	JmjC domain-containing protein.	0.414
F4RF20_MELLP	F4RZ35_MELLP	F4RF20	F4RZ35	JmjC domain-containing protein.	JmjC domain-containing protein.	0.588
F4RF20_MELLP	F4RZ36_MELLP	F4RF20	F4RZ36	JmjC domain-containing protein.	JmjN domain-containing protein.	0.588
F4RF20_MELLP	F4S3P7_MELLP	F4RF20	F4S3P7	JmjC domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.603
F4RMV7_MELLP	F4R9U8_MELLP	F4RMV7	F4R9U8	Uncharacterized protein.	Uncharacterized protein.	0.902
F4RPW9_MELLP	F4R926_MELLP	F4RPW9	F4R926	JmjC domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.459
F4RPW9_MELLP	F4RVI4_MELLP	F4RPW9	F4RVI4	JmjC domain-containing protein.	JmjC domain-containing protein.	0.495
F4RPW9_MELLP	F4RWY5_MELLP	F4RPW9	F4RWY5	JmjC domain-containing protein.	JmjC domain-containing protein.	0.470
F4RPW9_MELLP	F4RZ35_MELLP	F4RPW9	F4RZ35	JmjC domain-containing protein.	JmjC domain-containing protein.	0.414
F4RPW9_MELLP	F4RZ36_MELLP	F4RPW9	F4RZ36	JmjC domain-containing protein.	JmjN domain-containing protein.	0.414
F4RPW9_MELLP	F4S1Z1_MELLP	F4RPW9	F4S1Z1	JmjC domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.452