22 items (Melampsora laricipopulina) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4R9C0_MELLP	Bromo domain-containing protein. (744 aa)
	F4R6B6_MELLP	Uncharacterized protein. (448 aa)
	F4R509_MELLP	Transcription initiation factor TFIID subunit 9. (216 aa)
	F4RK62_MELLP	SGF29 C-terminal domain-containing protein. (323 aa)
	F4RSA0_MELLP	Uncharacterized protein. (291 aa)
	F4RTR0_MELLP	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family. (450 aa)
	F4RWC7_MELLP	TFIID_20kDa domain-containing protein. (124 aa)
	F4S1Y3_MELLP	Uncharacterized protein. (454 aa)
	F4S3L2_MELLP	WD_REPEATS_REGION domain-containing protein. (676 aa)
	F4S857_MELLP	FATC domain-containing protein. (563 aa)
	F4S858_MELLP	Uncharacterized protein. (283 aa)
	F4S859_MELLP	Uncharacterized protein. (1157 aa)
	F4S8Z1_MELLP	Uncharacterized protein. (287 aa)
	F4SDU9_MELLP	Uncharacterized protein. (380 aa)
	F4RB28_MELLP	Uncharacterized protein. (290 aa)
	F4RCI4_MELLP	Uncharacterized protein. (393 aa)
	F4RCT5_MELLP	Uncharacterized protein. (676 aa)
	F4RD40_MELLP	TAF domain-containing protein. (562 aa)
	F4REZ4_MELLP	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3723 aa)
	F4RF45_MELLP	Uncharacterized protein. (355 aa)
	SUS1	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] (129 aa)
	F4RJM2_MELLP	SCA7 domain-containing protein. (474 aa)

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4R509_MELLP	F4R6B6_MELLP	F4R509	F4R6B6	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.890
F4R509_MELLP	F4R9C0_MELLP	F4R509	F4R9C0	Transcription initiation factor TFIID subunit 9.	Bromo domain-containing protein.	0.997
F4R509_MELLP	F4RB28_MELLP	F4R509	F4RB28	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.998
F4R509_MELLP	F4RCI4_MELLP	F4R509	F4RCI4	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.940
F4R509_MELLP	F4RCT5_MELLP	F4R509	F4RCT5	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.994
F4R509_MELLP	F4RD40_MELLP	F4R509	F4RD40	Transcription initiation factor TFIID subunit 9.	TAF domain-containing protein.	0.998
F4R509_MELLP	F4REZ4_MELLP	F4R509	F4REZ4	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.890
F4R509_MELLP	F4RF45_MELLP	F4R509	F4RF45	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.988
F4R509_MELLP	F4RJM2_MELLP	F4R509	F4RJM2	Transcription initiation factor TFIID subunit 9.	SCA7 domain-containing protein.	0.997
F4R509_MELLP	F4RK62_MELLP	F4R509	F4RK62	Transcription initiation factor TFIID subunit 9.	SGF29 C-terminal domain-containing protein.	0.996
F4R509_MELLP	F4RSA0_MELLP	F4R509	F4RSA0	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.940
F4R509_MELLP	F4RTR0_MELLP	F4R509	F4RTR0	Transcription initiation factor TFIID subunit 9.	Putative ubiquitin C-terminal hydrolase Ubp8; Belongs to the peptidase C19 family.	0.987
F4R509_MELLP	F4RWC7_MELLP	F4R509	F4RWC7	Transcription initiation factor TFIID subunit 9.	TFIID_20kDa domain-containing protein.	0.998
F4R509_MELLP	F4S1Y3_MELLP	F4R509	F4S1Y3	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.997
F4R509_MELLP	F4S3L2_MELLP	F4R509	F4S3L2	Transcription initiation factor TFIID subunit 9.	WD_REPEATS_REGION domain-containing protein.	0.866
F4R509_MELLP	F4S857_MELLP	F4R509	F4S857	Transcription initiation factor TFIID subunit 9.	FATC domain-containing protein.	0.890
F4R509_MELLP	F4S858_MELLP	F4R509	F4S858	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.890
F4R509_MELLP	F4S859_MELLP	F4R509	F4S859	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.890
F4R509_MELLP	F4S8Z1_MELLP	F4R509	F4S8Z1	Transcription initiation factor TFIID subunit 9.	Uncharacterized protein.	0.930
F4R509_MELLP	SUS1	F4R509	F4RIX0	Transcription initiation factor TFIID subunit 9.	Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]	0.964