(41 nodes) Cytosolic large ribosomal subunit network (Melampsora laricipopulina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F4S3S0_MELLP	KOW domain-containing protein. (104 aa)
	F4S214_MELLP	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (158 aa)
	F4S213_MELLP	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (111 aa)
	F4S0W7_MELLP	60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (172 aa)
	F4S0B7_MELLP	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (201 aa)
	F4S016_MELLP	Ribosomal_L19e domain-containing protein. (198 aa)
	F4RYW4_MELLP	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
	F4RXH3_MELLP	Uncharacterized protein. (113 aa)
	F4RX61_MELLP	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (71 aa)
	F4RWS3_MELLP	Uncharacterized protein. (160 aa)
	F4RVB8_MELLP	Uncharacterized protein. (123 aa)
	F4SA97_MELLP	Ribosomal_L7Ae domain-containing protein. (271 aa)
	F4RU36_MELLP	Uncharacterized protein. (124 aa)
	F4RR24_MELLP	Ribosomal_L14e domain-containing protein. (147 aa)
	F4RQ88_MELLP	Ribosomal_L28e domain-containing protein. (133 aa)
	F4RMW3_MELLP	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	F4RLF5_MELLP	Ribosomal_L16 domain-containing protein. (220 aa)
	F4RJY0_MELLP	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family. (129 aa)
	F4RJ37_MELLP	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	F4RH89_MELLP	Ribosomal_L7Ae domain-containing protein. (109 aa)
	F4RGV9_MELLP	Uncharacterized protein. (104 aa)
	F4RGQ3_MELLP	Uncharacterized protein. (192 aa)
	F4RFP1_MELLP	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (144 aa)
	F4RFE2_MELLP	Uncharacterized protein. (92 aa)
	F4RFA2_MELLP	CP-type G domain-containing protein. (669 aa)
	F4REB8_MELLP	Uncharacterized protein. (76 aa)
	F4RE66_MELLP	Ribosomal_L18A domain-containing protein. (70 aa)
	F4RD86_MELLP	Ribosomal_L18e/L15P domain-containing protein. (183 aa)
	F4RBQ1_MELLP	Uncharacterized protein. (120 aa)
	F4R9X0_MELLP	Uncharacterized protein. (51 aa)
	F4R881_MELLP	Ribosomal_L18_c domain-containing protein. (297 aa)
	F4R646_MELLP	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	F4R3M9_MELLP	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (310 aa)
	F4S777_MELLP	Uncharacterized protein. (142 aa)
	F4S7A9_MELLP	Uncharacterized protein. (209 aa)
	F4S8H6_MELLP	Ribos_L4_asso_C domain-containing protein. (377 aa)
	F4S607_MELLP	Ribosomal_L2_C domain-containing protein. (254 aa)
	F4S5D2_MELLP	Uncharacterized protein. (128 aa)
	F4S4U5_MELLP	Uncharacterized protein. (116 aa)
	F4S4A8_MELLP	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	F4S218_MELLP	Uncharacterized protein. (205 aa)

Your Current Organism:

Melampsora laricipopulina

NCBI taxonomy Id: 747676
Other names: M. larici-populina 98AG31, Melampsora larici-populina 98AG31, Melampsora laricis-populina 98AG31

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F4R3M9_MELLP	F4R646_MELLP	F4R3M9	F4R646	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
F4R3M9_MELLP	F4R881_MELLP	F4R3M9	F4R881	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L18_c domain-containing protein.	0.999
F4R3M9_MELLP	F4R9X0_MELLP	F4R3M9	F4R9X0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999
F4R3M9_MELLP	F4RBQ1_MELLP	F4R3M9	F4RBQ1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999
F4R3M9_MELLP	F4RE66_MELLP	F4R3M9	F4RE66	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L18A domain-containing protein.	0.987
F4R3M9_MELLP	F4REB8_MELLP	F4R3M9	F4REB8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.977
F4R3M9_MELLP	F4RFA2_MELLP	F4R3M9	F4RFA2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	CP-type G domain-containing protein.	0.861
F4R3M9_MELLP	F4RFE2_MELLP	F4R3M9	F4RFE2	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.985
F4R3M9_MELLP	F4RFP1_MELLP	F4R3M9	F4RFP1	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
F4R3M9_MELLP	F4RGQ3_MELLP	F4R3M9	F4RGQ3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999
F4R3M9_MELLP	F4RGV9_MELLP	F4R3M9	F4RGV9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999
F4R3M9_MELLP	F4RH89_MELLP	F4R3M9	F4RH89	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L7Ae domain-containing protein.	0.999
F4R3M9_MELLP	F4RJ37_MELLP	F4R3M9	F4RJ37	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.	0.999
F4R3M9_MELLP	F4RJY0_MELLP	F4R3M9	F4RJY0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
F4R3M9_MELLP	F4RLF5_MELLP	F4R3M9	F4RLF5	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L16 domain-containing protein.	0.999
F4R3M9_MELLP	F4RMW3_MELLP	F4R3M9	F4RMW3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
F4R3M9_MELLP	F4RQ88_MELLP	F4R3M9	F4RQ88	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L28e domain-containing protein.	0.999
F4R3M9_MELLP	F4RR24_MELLP	F4R3M9	F4RR24	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Ribosomal_L14e domain-containing protein.	0.999
F4R3M9_MELLP	F4RU36_MELLP	F4R3M9	F4RU36	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999
F4R3M9_MELLP	F4RVB8_MELLP	F4R3M9	F4RVB8	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	Uncharacterized protein.	0.999