STRINGSTRING
NH8B_0690 NH8B_0690 NH8B_0691 NH8B_0691 NH8B_0692 NH8B_0692 NH8B_0693 NH8B_0693 cas1 cas1 NH8B_0696 NH8B_0696
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NH8B_0690CRISPR-associated protein, Cse1 family. (535 aa)
NH8B_0691CRISPR-associated protein, Cse2 family. (205 aa)
NH8B_0692CRISPR-associated protein, Cse4 family. (349 aa)
NH8B_0693CRISPR-associated protein Cas5. (254 aa)
cas1CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (302 aa)
NH8B_0696CRISPR associated protein Cas2. (98 aa)
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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