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NH8B_2293 NH8B_2293 NH8B_3971 NH8B_3971 lptE lptE NH8B_3902 NH8B_3902 NH8B_3876 NH8B_3876 NH8B_3870 NH8B_3870 NH8B_3856 NH8B_3856 NH8B_3806 NH8B_3806 NH8B_3693 NH8B_3693 pilQ pilQ pilN pilN pilM pilM mutM mutM lolB lolB NH8B_3537 NH8B_3537 NH8B_3441 NH8B_3441 NH8B_3380 NH8B_3380 NH8B_3365 NH8B_3365 NH8B_3306 NH8B_3306 bamB bamB NH8B_3139 NH8B_3139 NH8B_3129 NH8B_3129 NH8B_3070 NH8B_3070 NH8B_3059 NH8B_3059 NH8B_3001 NH8B_3001 bamE bamE NH8B_2923 NH8B_2923 NH8B_2863 NH8B_2863 NH8B_2796 NH8B_2796 ybdK-2 ybdK-2 NH8B_2717 NH8B_2717 ppiC-5 ppiC-5 ppiC-4 ppiC-4 NH8B_2632 NH8B_2632 ppiC-3 ppiC-3 ybdK ybdK bamA bamA NH8B_2419 NH8B_2419 NH8B_2394 NH8B_2394 NH8B_2321 NH8B_2321 NH8B_0052 NH8B_0052 NH8B_0072 NH8B_0072 rlpA rlpA NH8B_0199 NH8B_0199 pal pal NH8B_0259 NH8B_0259 lptD lptD wzx wzx NH8B_0720 NH8B_0720 mtgA mtgA NH8B_0811 NH8B_0811 dnaK dnaK NH8B_0911 NH8B_0911 NH8B_1066 NH8B_1066 NH8B_1274 NH8B_1274 NH8B_1496 NH8B_1496 NH8B_1497 NH8B_1497 ppiC ppiC ppiC-2 ppiC-2 NH8B_1877 NH8B_1877 bamD bamD NH8B_2295 NH8B_2295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NH8B_2293Peroxiredoxin/glutaredoxin family protein. (243 aa)
NH8B_3971TonB-dependent siderophore receptor. (757 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (176 aa)
NH8B_3902Lytic transglycosylase, catalytic. (240 aa)
NH8B_3876Surface antigen (D15). (589 aa)
NH8B_3870Antimicrobial peptide resistance and lipid A acylation PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. (183 aa)
NH8B_3856Lytic transglycosylase, catalytic. (185 aa)
NH8B_3806LppC family lipoprotein. (365 aa)
NH8B_3693Type IV pilus assembly FimV-related protein. (112 aa)
pilQType IV pilus secretin PilQ. (691 aa)
pilNType IV fimbrial biogenesis protein PilN. (194 aa)
pilMType IV pilus assembly protein PilM. (370 aa)
mutMformamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (272 aa)
lolBOuter membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (181 aa)
NH8B_3537Glycosyl transferase, family 4. (380 aa)
NH8B_3441MltA domain protein. (415 aa)
NH8B_3380Aminotransferase class I and II. (435 aa)
NH8B_3365Protein of unknown function; DUF1615. (420 aa)
NH8B_3306PHP domain protein. (284 aa)
bamBOuter membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (380 aa)
NH8B_3139Type II and III secretion system protein; Belongs to the bacterial secretin family. (669 aa)
NH8B_3129Lytic transglycosylase, catalytic. (219 aa)
NH8B_3070Hypothetical protein. (261 aa)
NH8B_3059ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family. (245 aa)
NH8B_3001TonB-dependent siderophore receptor. (694 aa)
bamESmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (128 aa)
NH8B_292317 kDa surface antigen. (163 aa)
NH8B_2863Lytic murein transglycosylase B. (343 aa)
NH8B_2796Protein of unknown function; DUF2271. (157 aa)
ybdK-2Glutamate--cysteine ligase, GCS2 family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (371 aa)
NH8B_2717FAD dependent oxidoreductase. (413 aa)
ppiC-5PpiC-type peptidyl-prolyl cis-trans isomerase; K03769. (244 aa)
ppiC-4PpiC-type peptidyl-prolyl cis-trans isomerase; K03769. (244 aa)
NH8B_2632Outer membrane protein, OMPP1/FadL/TodX family. (486 aa)
ppiC-3PpiC-type peptidyl-prolyl cis-trans isomerase; K03770. (609 aa)
ybdKGlutamate--cysteine ligase, GCS2 family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (377 aa)
bamASurface antigen, Omp85-like; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (762 aa)
NH8B_2419Lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (180 aa)
NH8B_2394Protein of unknown function; DUF330. (192 aa)
NH8B_2321Putative lipoprotein. (95 aa)
NH8B_0052Lipid A 3-O-deacylase (PagL) superfamily protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. (171 aa)
NH8B_007217 kDa surface antigen. (175 aa)
rlpARare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. (291 aa)
NH8B_0199YfaZ family protein. (175 aa)
palOmpA family outer membrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (178 aa)
NH8B_0259Urate catabolism protein. (328 aa)
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (737 aa)
wzxPolysaccharide biosynthesis protein/O-antigen translocase. (429 aa)
NH8B_0720Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (359 aa)
mtgAMonofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (227 aa)
NH8B_0811Uncharacterized lipoprotein. (378 aa)
dnaKChaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (638 aa)
NH8B_0911TonB-dependent siderophore receptor. (701 aa)
NH8B_1066Aminotransferase class I and II. (383 aa)
NH8B_1274Aminotransferase class I and II. (384 aa)
NH8B_1496Putative transmembrane protein. (778 aa)
NH8B_1497Tfp pilus assembly protein FimV-like protein. (724 aa)
ppiCPpiC-type peptidyl-prolyl cis-trans isomerase; K03769. (258 aa)
ppiC-2PpiC-type peptidyl-prolyl cis-trans isomerase; K03769. (264 aa)
NH8B_1877Protein of unknown function; DUF3359. (105 aa)
bamDCompetence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (263 aa)
NH8B_2295Soluble lytic murein transglycosylase. (625 aa)
Your Current Organism:
Pseudogulbenkiania sp. NH8B
NCBI taxonomy Id: 748280
Other names: P. sp. NH8B
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