STRINGSTRING
wdr46 wdr46 LOC107592227 LOC107592227 ENSSGRP00000013069 ENSSGRP00000013069 ENSSGRP00000017321 ENSSGRP00000017321 Pdcd11 Pdcd11 LOC107583586 LOC107583586 rrp9 rrp9 ENSSGRP00000031624 ENSSGRP00000031624 ENSSGRP00000034657 ENSSGRP00000034657 ENSSGRP00000041844 ENSSGRP00000041844 ENSSGRP00000042739 ENSSGRP00000042739 caprin1 caprin1 LOC107559694 LOC107559694 nop58 nop58 ENSSGRP00000061315 ENSSGRP00000061315 ENSSGRP00000066233 ENSSGRP00000066233 LOC107553989 LOC107553989 LOC107585992 LOC107585992 LOC107583899 LOC107583899 ENSSGRP00000084572 ENSSGRP00000084572 ENSSGRP00000090606 ENSSGRP00000090606 Heatr1 Heatr1 ENSSGRP00000092399 ENSSGRP00000092399 Bms1 Bms1 ENSSGRP00000095040 ENSSGRP00000095040 RRP7A RRP7A ENSSGRP00000102036 ENSSGRP00000102036 ENSSGRP00000102732 ENSSGRP00000102732 ENSSGRP00000103704 ENSSGRP00000103704 glmn glmn fcf1 fcf1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wdr46U3 small nucleolar RNA-associated protein 7. (437 aa)
LOC107592227RRNA 2'-O-methyltransferase fibrillarin-like. (312 aa)
ENSSGRP00000013069UTP3 small subunit processome component. (440 aa)
ENSSGRP00000017321U3 small nucleolar ribonucleoprotein protein LCP5. (332 aa)
Pdcd11RRNA biogenesis protein RRP5. (914 aa)
LOC107583586U3 small nucleolar RNA-associated protein 5. (691 aa)
rrp9U3 small nucleolar RNA-interacting protein 2 isoform X1. (471 aa)
ENSSGRP00000031624UTP6 small subunit processome component. (552 aa)
ENSSGRP00000034657Nucleolar protein 6 (RNA-associated). (821 aa)
ENSSGRP00000041844Protein AATF-like isoform X1. (529 aa)
ENSSGRP00000042739U3 small nucleolar RNA-associated protein 21. (745 aa)
caprin1RNA cytidine acetyltransferase-like. (1027 aa)
LOC107559694U3 small nucleolar RNA-associated protein 15 homolog. (528 aa)
nop58Nucleolar protein 58 isoform X1. (548 aa)
ENSSGRP00000061315LOW QUALITY PROTEIN: periodic tryptophan protein 2 homolog. (925 aa)
ENSSGRP00000066233annotation not available (682 aa)
LOC107553989U3 small nucleolar RNA-associated protein 4 homolog. (685 aa)
LOC107585992U3 small nucleolar ribonucleoprotein protein MPP10-like isoform X1. (684 aa)
LOC107583899U3 small nucleolar RNA-associated protein 4 homolog. (630 aa)
ENSSGRP00000084572Ribosome biogenesis protein ENP2. (656 aa)
ENSSGRP00000090606U3 small nucleolar ribonucleoprotein protein IMP4-like. (305 aa)
Heatr1U3 small nucleolar RNA-associated protein 10. (2153 aa)
ENSSGRP00000092399WD repeat domain 75. (796 aa)
Bms1Ribosome biogenesis protein BMS1 homolog. (1231 aa)
ENSSGRP00000095040Nucleolar protein 56-like. (496 aa)
RRP7APutative ribosomal RNA-processing protein 7 homolog B. (143 aa)
ENSSGRP00000102036WD repeat domain 3. (925 aa)
ENSSGRP00000102732Matrix metallopeptidase 15a. (234 aa)
ENSSGRP00000103704RNA 3'-terminal phosphate cyclase-like protein. (345 aa)
glmnGlomulin. (592 aa)
fcf1U3 small nucleolar RNA-associated protein 24. (211 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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