(16 nodes) Mixed, incl. Pwp2p-containing subcomplex of 90S preribosome, and Box C/D RNP complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000005175	RNA 3'-terminal phosphate cyclase-like protein. (281 aa)
	ENSSGRP00000015598	WD repeat domain 36. (656 aa)
	ENSSGRP00000031192	Nucleolar protein 56-like isoform X1. (541 aa)
	ENSSGRP00000033381	RRNA 2'-O-methyltransferase fibrillarin-like. (337 aa)
	ENSSGRP00000038627	Nucleolar protein 6 (RNA-associated). (767 aa)
	ENSSGRP00000047930	Ribosomal RNA processing 7 homolog A. (271 aa)
	LOC107583058	U3 small nucleolar RNA-associated protein 5. (673 aa)
	ENSSGRP00000058456	U3 small nucleolar RNA-associated protein 10. (1425 aa)
	LOC107600050	U3 small nucleolar RNA-associated protein 15 homolog. (476 aa)
	tbl3	U3 small nucleolar RNA-associated protein 13. (915 aa)
	ENSSGRP00000071420	WD repeat domain 3. (833 aa)
	ENSSGRP00000074775	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (251 aa)
	utp6	U3 small nucleolar RNA-associated protein 6 homolog isoform X1. (597 aa)
	ENSSGRP00000080038	NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17). (837 aa)
	LOC107588835	Periodic tryptophan protein 2 homolog. (987 aa)
	ENSSGRP00000107996	annotation not available (65 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005175	ENSSGRP00000015598	ENSSGRP00000005175	ENSSGRP00000015598	RNA 3'-terminal phosphate cyclase-like protein.	WD repeat domain 36.	0.996
ENSSGRP00000005175	ENSSGRP00000031192	ENSSGRP00000005175	ENSSGRP00000031192	RNA 3'-terminal phosphate cyclase-like protein.	Nucleolar protein 56-like isoform X1.	0.978
ENSSGRP00000005175	ENSSGRP00000033381	ENSSGRP00000005175	ENSSGRP00000033381	RNA 3'-terminal phosphate cyclase-like protein.	RRNA 2'-O-methyltransferase fibrillarin-like.	0.972
ENSSGRP00000005175	ENSSGRP00000038627	ENSSGRP00000005175	ENSSGRP00000038627	RNA 3'-terminal phosphate cyclase-like protein.	Nucleolar protein 6 (RNA-associated).	0.994
ENSSGRP00000005175	ENSSGRP00000047930	ENSSGRP00000005175	ENSSGRP00000047930	RNA 3'-terminal phosphate cyclase-like protein.	Ribosomal RNA processing 7 homolog A.	0.996
ENSSGRP00000005175	ENSSGRP00000058456	ENSSGRP00000005175	ENSSGRP00000058456	RNA 3'-terminal phosphate cyclase-like protein.	U3 small nucleolar RNA-associated protein 10.	0.996
ENSSGRP00000005175	ENSSGRP00000071420	ENSSGRP00000005175	ENSSGRP00000071420	RNA 3'-terminal phosphate cyclase-like protein.	WD repeat domain 3.	0.993
ENSSGRP00000005175	ENSSGRP00000074775	ENSSGRP00000005175	ENSSGRP00000074775	RNA 3'-terminal phosphate cyclase-like protein.	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	0.995
ENSSGRP00000005175	ENSSGRP00000080038	ENSSGRP00000005175	ENSSGRP00000080038	RNA 3'-terminal phosphate cyclase-like protein.	NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17).	0.994
ENSSGRP00000005175	ENSSGRP00000107996	ENSSGRP00000005175	ENSSGRP00000107996	RNA 3'-terminal phosphate cyclase-like protein.	annotation not available	0.993
ENSSGRP00000005175	LOC107583058	ENSSGRP00000005175	ENSSGRP00000057062	RNA 3'-terminal phosphate cyclase-like protein.	U3 small nucleolar RNA-associated protein 5.	0.998
ENSSGRP00000005175	LOC107588835	ENSSGRP00000005175	ENSSGRP00000099647	RNA 3'-terminal phosphate cyclase-like protein.	Periodic tryptophan protein 2 homolog.	0.998
ENSSGRP00000005175	LOC107600050	ENSSGRP00000005175	ENSSGRP00000063112	RNA 3'-terminal phosphate cyclase-like protein.	U3 small nucleolar RNA-associated protein 15 homolog.	0.995
ENSSGRP00000005175	tbl3	ENSSGRP00000005175	ENSSGRP00000063524	RNA 3'-terminal phosphate cyclase-like protein.	U3 small nucleolar RNA-associated protein 13.	0.999
ENSSGRP00000005175	utp6	ENSSGRP00000005175	ENSSGRP00000079646	RNA 3'-terminal phosphate cyclase-like protein.	U3 small nucleolar RNA-associated protein 6 homolog isoform X1.	0.993
ENSSGRP00000015598	ENSSGRP00000005175	ENSSGRP00000015598	ENSSGRP00000005175	WD repeat domain 36.	RNA 3'-terminal phosphate cyclase-like protein.	0.996
ENSSGRP00000015598	ENSSGRP00000031192	ENSSGRP00000015598	ENSSGRP00000031192	WD repeat domain 36.	Nucleolar protein 56-like isoform X1.	0.996
ENSSGRP00000015598	ENSSGRP00000033381	ENSSGRP00000015598	ENSSGRP00000033381	WD repeat domain 36.	RRNA 2'-O-methyltransferase fibrillarin-like.	0.994
ENSSGRP00000015598	ENSSGRP00000038627	ENSSGRP00000015598	ENSSGRP00000038627	WD repeat domain 36.	Nucleolar protein 6 (RNA-associated).	0.999
ENSSGRP00000015598	ENSSGRP00000047930	ENSSGRP00000015598	ENSSGRP00000047930	WD repeat domain 36.	Ribosomal RNA processing 7 homolog A.	0.996