STRINGSTRING
LOC107554344 LOC107554344 LOC107583584 LOC107583584 ENSSGRP00000031583 ENSSGRP00000031583 ENSSGRP00000031585 ENSSGRP00000031585 LOC107589545 LOC107589545 trmt1 trmt1 LOC107600515 LOC107600515 ENSSGRP00000042424 ENSSGRP00000042424 ENSSGRP00000044216 ENSSGRP00000044216 Dus3l Dus3l ENSSGRP00000057105 ENSSGRP00000057105 LOC107601270 LOC107601270 LOC107567767 LOC107567767 LOC107582491 LOC107582491 ENSSGRP00000086134 ENSSGRP00000086134 mettl1 mettl1 trmt6 trmt6 LOC107590391 LOC107590391 LOC107551989 LOC107551989
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107554344TRNA pseudouridine(38/39) synthase-like isoform X1. (474 aa)
LOC107583584TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit. (458 aa)
ENSSGRP00000031583annotation not available (88 aa)
ENSSGRP00000031585annotation not available (75 aa)
LOC107589545TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like. (305 aa)
trmt1TRNA (guanine(26)-N(2))-dimethyltransferase isoform X1. (660 aa)
LOC107600515TRNA (guanine(10)-N2)-methyltransferase homolog. (468 aa)
ENSSGRP00000042424NOP2/Sun RNA methyltransferase 2. (682 aa)
ENSSGRP00000044216TRNA pseudouridine synthase A, mitochondrial-like. (115 aa)
Dus3lTRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like. (460 aa)
ENSSGRP00000057105tRNA methyltransferase 61B. (197 aa)
LOC107601270TRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1. (475 aa)
LOC107567767TRNA (guanine(10)-N2)-methyltransferase homolog. (474 aa)
LOC107582491TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like. (305 aa)
ENSSGRP00000086134TRNA methyltransferase 10 homolog B-like. (317 aa)
mettl1TRNA (guanine-N(7)-)-methyltransferase. (246 aa)
trmt6tRNA methyltransferase 6. (501 aa)
LOC107590391tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like. (476 aa)
LOC107551989TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like. (415 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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