(13 nodes) tRNA methyltransferase complex, and tRNA pseudouridine synthase activity network (Sinocyclocheilus grahami)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107554344	TRNA pseudouridine(38/39) synthase-like isoform X1. (474 aa)
	LOC107583584	TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit. (458 aa)
	ENSSGRP00000031583	annotation not available (88 aa)
	ENSSGRP00000031585	annotation not available (75 aa)
	LOC107589545	TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like. (305 aa)
	ENSSGRP00000044216	TRNA pseudouridine synthase A, mitochondrial-like. (115 aa)
	Dus3l	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like. (460 aa)
	ENSSGRP00000057105	tRNA methyltransferase 61B. (197 aa)
	LOC107582491	TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like. (305 aa)
	ENSSGRP00000086134	TRNA methyltransferase 10 homolog B-like. (317 aa)
	mettl1	TRNA (guanine-N(7)-)-methyltransferase. (246 aa)
	trmt6	tRNA methyltransferase 6. (501 aa)
	LOC107551989	TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like. (415 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dus3l	ENSSGRP00000031583	ENSSGRP00000051266	ENSSGRP00000031583	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	annotation not available	0.786
Dus3l	ENSSGRP00000031585	ENSSGRP00000051266	ENSSGRP00000031585	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	annotation not available	0.786
Dus3l	ENSSGRP00000044216	ENSSGRP00000051266	ENSSGRP00000044216	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA pseudouridine synthase A, mitochondrial-like.	0.969
Dus3l	ENSSGRP00000057105	ENSSGRP00000051266	ENSSGRP00000057105	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	tRNA methyltransferase 61B.	0.752
Dus3l	ENSSGRP00000086134	ENSSGRP00000051266	ENSSGRP00000086134	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA methyltransferase 10 homolog B-like.	0.687
Dus3l	LOC107551989	ENSSGRP00000051266	ENSSGRP00000112515	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like.	0.786
Dus3l	LOC107554344	ENSSGRP00000051266	ENSSGRP00000018728	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA pseudouridine(38/39) synthase-like isoform X1.	0.479
Dus3l	LOC107582491	ENSSGRP00000051266	ENSSGRP00000082332	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.	0.882
Dus3l	LOC107583584	ENSSGRP00000051266	ENSSGRP00000022933	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.	0.752
Dus3l	LOC107589545	ENSSGRP00000051266	ENSSGRP00000036516	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.	0.882
Dus3l	mettl1	ENSSGRP00000051266	ENSSGRP00000091472	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	TRNA (guanine-N(7)-)-methyltransferase.	0.871
Dus3l	trmt6	ENSSGRP00000051266	ENSSGRP00000095580	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	tRNA methyltransferase 6.	0.750
ENSSGRP00000031583	Dus3l	ENSSGRP00000031583	ENSSGRP00000051266	annotation not available	TRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like.	0.786
ENSSGRP00000031583	ENSSGRP00000044216	ENSSGRP00000031583	ENSSGRP00000044216	annotation not available	TRNA pseudouridine synthase A, mitochondrial-like.	0.953
ENSSGRP00000031583	ENSSGRP00000057105	ENSSGRP00000031583	ENSSGRP00000057105	annotation not available	tRNA methyltransferase 61B.	0.769
ENSSGRP00000031583	ENSSGRP00000086134	ENSSGRP00000031583	ENSSGRP00000086134	annotation not available	TRNA methyltransferase 10 homolog B-like.	0.707
ENSSGRP00000031583	LOC107554344	ENSSGRP00000031583	ENSSGRP00000018728	annotation not available	TRNA pseudouridine(38/39) synthase-like isoform X1.	0.819
ENSSGRP00000031583	LOC107582491	ENSSGRP00000031583	ENSSGRP00000082332	annotation not available	TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.	0.892
ENSSGRP00000031583	LOC107583584	ENSSGRP00000031583	ENSSGRP00000022933	annotation not available	TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.	0.769
ENSSGRP00000031583	LOC107589545	ENSSGRP00000031583	ENSSGRP00000036516	annotation not available	TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.	0.892