(6 nodes) NUC129 domain, and Domain of unknown function (DUF4602) network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107567930	Nucleolar protein 11-like isoform X1. (717 aa)
	LOC107558771	Uncharacterized protein C1orf131 homolog isoform X1. (232 aa)
	ENSSGRP00000045256	Nucleolar protein 7. (219 aa)
	ENSSGRP00000052170	annotation not available (151 aa)
	ENSSGRP00000066642	Nucleolar protein 7. (228 aa)
	nol11	Nucleolar protein 11 isoform X1. (718 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000045256	ENSSGRP00000052170	ENSSGRP00000045256	ENSSGRP00000052170	Nucleolar protein 7.	annotation not available	0.593
ENSSGRP00000045256	LOC107558771	ENSSGRP00000045256	ENSSGRP00000044401	Nucleolar protein 7.	Uncharacterized protein C1orf131 homolog isoform X1.	0.593
ENSSGRP00000045256	LOC107567930	ENSSGRP00000045256	ENSSGRP00000023830	Nucleolar protein 7.	Nucleolar protein 11-like isoform X1.	0.839
ENSSGRP00000045256	nol11	ENSSGRP00000045256	ENSSGRP00000086158	Nucleolar protein 7.	Nucleolar protein 11 isoform X1.	0.839
ENSSGRP00000052170	ENSSGRP00000045256	ENSSGRP00000052170	ENSSGRP00000045256	annotation not available	Nucleolar protein 7.	0.593
ENSSGRP00000052170	ENSSGRP00000066642	ENSSGRP00000052170	ENSSGRP00000066642	annotation not available	Nucleolar protein 7.	0.593
ENSSGRP00000052170	LOC107567930	ENSSGRP00000052170	ENSSGRP00000023830	annotation not available	Nucleolar protein 11-like isoform X1.	0.607
ENSSGRP00000052170	nol11	ENSSGRP00000052170	ENSSGRP00000086158	annotation not available	Nucleolar protein 11 isoform X1.	0.607
ENSSGRP00000066642	ENSSGRP00000052170	ENSSGRP00000066642	ENSSGRP00000052170	Nucleolar protein 7.	annotation not available	0.593
ENSSGRP00000066642	LOC107558771	ENSSGRP00000066642	ENSSGRP00000044401	Nucleolar protein 7.	Uncharacterized protein C1orf131 homolog isoform X1.	0.593
ENSSGRP00000066642	LOC107567930	ENSSGRP00000066642	ENSSGRP00000023830	Nucleolar protein 7.	Nucleolar protein 11-like isoform X1.	0.839
ENSSGRP00000066642	nol11	ENSSGRP00000066642	ENSSGRP00000086158	Nucleolar protein 7.	Nucleolar protein 11 isoform X1.	0.839
LOC107558771	ENSSGRP00000045256	ENSSGRP00000044401	ENSSGRP00000045256	Uncharacterized protein C1orf131 homolog isoform X1.	Nucleolar protein 7.	0.593
LOC107558771	ENSSGRP00000066642	ENSSGRP00000044401	ENSSGRP00000066642	Uncharacterized protein C1orf131 homolog isoform X1.	Nucleolar protein 7.	0.593
LOC107558771	LOC107567930	ENSSGRP00000044401	ENSSGRP00000023830	Uncharacterized protein C1orf131 homolog isoform X1.	Nucleolar protein 11-like isoform X1.	0.607
LOC107558771	nol11	ENSSGRP00000044401	ENSSGRP00000086158	Uncharacterized protein C1orf131 homolog isoform X1.	Nucleolar protein 11 isoform X1.	0.607
LOC107567930	ENSSGRP00000045256	ENSSGRP00000023830	ENSSGRP00000045256	Nucleolar protein 11-like isoform X1.	Nucleolar protein 7.	0.839
LOC107567930	ENSSGRP00000052170	ENSSGRP00000023830	ENSSGRP00000052170	Nucleolar protein 11-like isoform X1.	annotation not available	0.607
LOC107567930	ENSSGRP00000066642	ENSSGRP00000023830	ENSSGRP00000066642	Nucleolar protein 11-like isoform X1.	Nucleolar protein 7.	0.839
LOC107567930	LOC107558771	ENSSGRP00000023830	ENSSGRP00000044401	Nucleolar protein 11-like isoform X1.	Uncharacterized protein C1orf131 homolog isoform X1.	0.607