(5 nodes) Mixed, incl. RNA 2-O ribose methyltransferase substrate binding, and tRNA pseudouridine synthase D (TruD) network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000014818	GTP-binding protein 8-like. (159 aa)
	LOC107594807	RNA pseudouridylate synthase domain-containing protein 2-like. (515 aa)
	LOC107565923	Mitochondrial ribosome-associated GTPase 1. (319 aa)
	ENSSGRP00000092959	16S rRNA (guanosine(1370)-2'-O)-methyltransferase. (338 aa)
	ENSSGRP00000101933	Pseudouridine synthase 7 like. (306 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000014818	ENSSGRP00000092959	ENSSGRP00000014818	ENSSGRP00000092959	GTP-binding protein 8-like.	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	0.886
ENSSGRP00000014818	ENSSGRP00000101933	ENSSGRP00000014818	ENSSGRP00000101933	GTP-binding protein 8-like.	Pseudouridine synthase 7 like.	0.839
ENSSGRP00000014818	LOC107565923	ENSSGRP00000014818	ENSSGRP00000089780	GTP-binding protein 8-like.	Mitochondrial ribosome-associated GTPase 1.	0.952
ENSSGRP00000014818	LOC107594807	ENSSGRP00000014818	ENSSGRP00000086706	GTP-binding protein 8-like.	RNA pseudouridylate synthase domain-containing protein 2-like.	0.807
ENSSGRP00000092959	ENSSGRP00000014818	ENSSGRP00000092959	ENSSGRP00000014818	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	GTP-binding protein 8-like.	0.886
ENSSGRP00000092959	ENSSGRP00000101933	ENSSGRP00000092959	ENSSGRP00000101933	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	Pseudouridine synthase 7 like.	0.794
ENSSGRP00000092959	LOC107565923	ENSSGRP00000092959	ENSSGRP00000089780	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	Mitochondrial ribosome-associated GTPase 1.	0.893
ENSSGRP00000092959	LOC107594807	ENSSGRP00000092959	ENSSGRP00000086706	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	RNA pseudouridylate synthase domain-containing protein 2-like.	0.822
ENSSGRP00000101933	ENSSGRP00000014818	ENSSGRP00000101933	ENSSGRP00000014818	Pseudouridine synthase 7 like.	GTP-binding protein 8-like.	0.839
ENSSGRP00000101933	ENSSGRP00000092959	ENSSGRP00000101933	ENSSGRP00000092959	Pseudouridine synthase 7 like.	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	0.794
ENSSGRP00000101933	LOC107565923	ENSSGRP00000101933	ENSSGRP00000089780	Pseudouridine synthase 7 like.	Mitochondrial ribosome-associated GTPase 1.	0.857
ENSSGRP00000101933	LOC107594807	ENSSGRP00000101933	ENSSGRP00000086706	Pseudouridine synthase 7 like.	RNA pseudouridylate synthase domain-containing protein 2-like.	0.882
LOC107565923	ENSSGRP00000014818	ENSSGRP00000089780	ENSSGRP00000014818	Mitochondrial ribosome-associated GTPase 1.	GTP-binding protein 8-like.	0.952
LOC107565923	ENSSGRP00000092959	ENSSGRP00000089780	ENSSGRP00000092959	Mitochondrial ribosome-associated GTPase 1.	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	0.893
LOC107565923	ENSSGRP00000101933	ENSSGRP00000089780	ENSSGRP00000101933	Mitochondrial ribosome-associated GTPase 1.	Pseudouridine synthase 7 like.	0.857
LOC107565923	LOC107594807	ENSSGRP00000089780	ENSSGRP00000086706	Mitochondrial ribosome-associated GTPase 1.	RNA pseudouridylate synthase domain-containing protein 2-like.	0.779
LOC107594807	ENSSGRP00000014818	ENSSGRP00000086706	ENSSGRP00000014818	RNA pseudouridylate synthase domain-containing protein 2-like.	GTP-binding protein 8-like.	0.807
LOC107594807	ENSSGRP00000092959	ENSSGRP00000086706	ENSSGRP00000092959	RNA pseudouridylate synthase domain-containing protein 2-like.	16S rRNA (guanosine(1370)-2'-O)-methyltransferase.	0.822
LOC107594807	ENSSGRP00000101933	ENSSGRP00000086706	ENSSGRP00000101933	RNA pseudouridylate synthase domain-containing protein 2-like.	Pseudouridine synthase 7 like.	0.882
LOC107594807	LOC107565923	ENSSGRP00000086706	ENSSGRP00000089780	RNA pseudouridylate synthase domain-containing protein 2-like.	Mitochondrial ribosome-associated GTPase 1.	0.779