STRINGSTRING
SART1 SART1 LOC107569189 LOC107569189 LOC107591625 LOC107591625 prpf4 prpf4 ENSSGRP00000029934 ENSSGRP00000029934 LOC107573053 LOC107573053 ENSSGRP00000060740 ENSSGRP00000060740 ENSSGRP00000067252 ENSSGRP00000067252 ddx23 ddx23 ENSSGRP00000080948 ENSSGRP00000080948 LOC107587780 LOC107587780 ENSSGRP00000087764 ENSSGRP00000087764 LOC107593623 LOC107593623 LOC107602857 LOC107602857
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SART1U4/U6.U5 tri-snRNP-associated protein 1. (773 aa)
LOC107569189U4/U6 small nuclear ribonucleoprotein SNU13. (128 aa)
LOC107591625U5 small nuclear ribonucleoprotein 40 kDa protein-like. (346 aa)
prpf4U4/U6 small nuclear ribonucleoprotein PRP4. (525 aa)
ENSSGRP00000029934U4/U6 small nuclear ribonucleoprotein Prp3-like. (643 aa)
LOC107573053U4/U6 small nuclear ribonucleoprotein SNU13. (145 aa)
ENSSGRP00000060740Peptidylprolyl isomerase H (cyclophilin H). (173 aa)
ENSSGRP00000067252Elongation factor Tu GTP binding domain containing 2. (801 aa)
ddx23Probable ATP-dependent RNA helicase DDX23. (807 aa)
ENSSGRP00000080948pre-mRNA processing factor 8. (2322 aa)
LOC107587780U4/U6 small nuclear ribonucleoprotein Prp31-like. (520 aa)
ENSSGRP00000087764PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (795 aa)
LOC107593623Thioredoxin-like protein 4A. (144 aa)
LOC107602857U5 small nuclear ribonucleoprotein 200 kDa helicase. (2134 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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