(15 nodes) Mixed, incl. Domain in DSRM or ZnF_C2H2 domain containing proteins, and Triplex DNA binding network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000005401	annotation not available (55 aa)
	ENSSGRP00000009058	Interleukin enhancer-binding factor 2 homolog. (233 aa)
	LOC107574081	Heterogeneous nuclear ribonucleoprotein C-like isoform X1. (288 aa)
	ENSSGRP00000020294	TAR DNA-binding protein 43-like isoform X1. (303 aa)
	ENSSGRP00000042792	Heterogeneous nuclear ribonucleoprotein K-like isoform X1. (90 aa)
	LOC107566606	Heterogeneous nuclear ribonucleoprotein C-like. (293 aa)
	LOC107599446	Heterogeneous nuclear ribonucleoprotein M-like isoform X1. (684 aa)
	ENSSGRP00000066771	Interleukin enhancer-binding factor 3 homolog. (790 aa)
	ENSSGRP00000066927	annotation not available (146 aa)
	ENSSGRP00000066928	annotation not available (84 aa)
	ilf2	Interleukin enhancer-binding factor 2. (387 aa)
	LOC107569394	RNA-binding protein EWS-like isoform X1. (628 aa)
	ENSSGRP00000079147	Interleukin enhancer-binding factor 3 homolog isoform X1. (810 aa)
	LOC107592307	RNA-binding protein EWS-like isoform X1. (581 aa)
	ENSSGRP00000108454	Heterogeneous nuclear ribonucleoprotein M. (686 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005401	ENSSGRP00000009058	ENSSGRP00000005401	ENSSGRP00000009058	annotation not available	Interleukin enhancer-binding factor 2 homolog.	0.544
ENSSGRP00000005401	ENSSGRP00000020294	ENSSGRP00000005401	ENSSGRP00000020294	annotation not available	TAR DNA-binding protein 43-like isoform X1.	0.681
ENSSGRP00000005401	ENSSGRP00000066771	ENSSGRP00000005401	ENSSGRP00000066771	annotation not available	Interleukin enhancer-binding factor 3 homolog.	0.678
ENSSGRP00000005401	ENSSGRP00000066927	ENSSGRP00000005401	ENSSGRP00000066927	annotation not available	annotation not available	0.681
ENSSGRP00000005401	ENSSGRP00000066928	ENSSGRP00000005401	ENSSGRP00000066928	annotation not available	annotation not available	0.681
ENSSGRP00000005401	ENSSGRP00000079147	ENSSGRP00000005401	ENSSGRP00000079147	annotation not available	Interleukin enhancer-binding factor 3 homolog isoform X1.	0.678
ENSSGRP00000005401	ENSSGRP00000108454	ENSSGRP00000005401	ENSSGRP00000108454	annotation not available	Heterogeneous nuclear ribonucleoprotein M.	0.835
ENSSGRP00000005401	LOC107566606	ENSSGRP00000005401	ENSSGRP00000050913	annotation not available	Heterogeneous nuclear ribonucleoprotein C-like.	0.760
ENSSGRP00000005401	LOC107569394	ENSSGRP00000005401	ENSSGRP00000077696	annotation not available	RNA-binding protein EWS-like isoform X1.	0.664
ENSSGRP00000005401	LOC107574081	ENSSGRP00000005401	ENSSGRP00000015399	annotation not available	Heterogeneous nuclear ribonucleoprotein C-like isoform X1.	0.760
ENSSGRP00000005401	LOC107592307	ENSSGRP00000005401	ENSSGRP00000082750	annotation not available	RNA-binding protein EWS-like isoform X1.	0.664
ENSSGRP00000005401	LOC107599446	ENSSGRP00000005401	ENSSGRP00000056108	annotation not available	Heterogeneous nuclear ribonucleoprotein M-like isoform X1.	0.835
ENSSGRP00000005401	ilf2	ENSSGRP00000005401	ENSSGRP00000072560	annotation not available	Interleukin enhancer-binding factor 2.	0.544
ENSSGRP00000009058	ENSSGRP00000005401	ENSSGRP00000009058	ENSSGRP00000005401	Interleukin enhancer-binding factor 2 homolog.	annotation not available	0.544
ENSSGRP00000009058	ENSSGRP00000020294	ENSSGRP00000009058	ENSSGRP00000020294	Interleukin enhancer-binding factor 2 homolog.	TAR DNA-binding protein 43-like isoform X1.	0.571
ENSSGRP00000009058	ENSSGRP00000042792	ENSSGRP00000009058	ENSSGRP00000042792	Interleukin enhancer-binding factor 2 homolog.	Heterogeneous nuclear ribonucleoprotein K-like isoform X1.	0.544
ENSSGRP00000009058	ENSSGRP00000066771	ENSSGRP00000009058	ENSSGRP00000066771	Interleukin enhancer-binding factor 2 homolog.	Interleukin enhancer-binding factor 3 homolog.	0.983
ENSSGRP00000009058	ENSSGRP00000066927	ENSSGRP00000009058	ENSSGRP00000066927	Interleukin enhancer-binding factor 2 homolog.	annotation not available	0.845
ENSSGRP00000009058	ENSSGRP00000066928	ENSSGRP00000009058	ENSSGRP00000066928	Interleukin enhancer-binding factor 2 homolog.	annotation not available	0.845
ENSSGRP00000009058	ENSSGRP00000079147	ENSSGRP00000009058	ENSSGRP00000079147	Interleukin enhancer-binding factor 2 homolog.	Interleukin enhancer-binding factor 3 homolog isoform X1.	0.983