(22 nodes) Mixed, incl. Negative regulation of mRNA splicing, via spliceosome, and Phospholipase binding network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107554282	Serine/arginine-rich splicing factor 1A. (256 aa)
	ENSSGRP00000005048	annotation not available (108 aa)
	LOC107581576	Serine/arginine-rich splicing factor 2-like. (222 aa)
	LOC107574816	Serine/arginine-rich splicing factor 10-like isoform X1. (228 aa)
	LOC107582602	Serine/arginine-rich splicing factor 1A-like. (259 aa)
	LOC107549009	Serine/arginine-rich splicing factor 9-like. (247 aa)
	ENSSGRP00000036265	annotation not available (183 aa)
	LOC107560829	Serine/arginine-rich splicing factor 9-like. (244 aa)
	LOC107569752	Serine/arginine-rich splicing factor 3-like. (164 aa)
	LOC107566380	Serine/arginine-rich splicing factor 2-like. (220 aa)
	LOC107601991	Serine/arginine-rich splicing factor 10-like isoform X1. (230 aa)
	srsf7	Serine/arginine-rich splicing factor 7 isoform X1. (226 aa)
	LOC107584442	Serine/arginine-rich splicing factor 3 isoform X1. (194 aa)
	LOC107548478	Serine/arginine-rich splicing factor 7-like. (254 aa)
	LOC107592988	Transformer-2 protein homolog beta-like isoform X1. (277 aa)
	ENSSGRP00000068035	annotation not available (88 aa)
	LOC107596141	Serine/arginine-rich splicing factor 7-like isoform X1. (256 aa)
	LOC107569308	Serine/arginine-rich splicing factor 6-like isoform X1. (375 aa)
	LOC107593614	Transformer-2 protein homolog alpha-like isoform X1. (315 aa)
	ENSSGRP00000101591	Transformer 2 alpha homolog. (181 aa)
	ENSSGRP00000109055	Serine/arginine-rich splicing factor 1B. (269 aa)
	ENSSGRP00000110009	Transformer-2 protein homolog beta-like. (65 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005048	ENSSGRP00000036265	ENSSGRP00000005048	ENSSGRP00000036265	annotation not available	annotation not available	0.777
ENSSGRP00000005048	ENSSGRP00000068035	ENSSGRP00000005048	ENSSGRP00000068035	annotation not available	annotation not available	0.948
ENSSGRP00000005048	ENSSGRP00000101591	ENSSGRP00000005048	ENSSGRP00000101591	annotation not available	Transformer 2 alpha homolog.	0.924
ENSSGRP00000005048	ENSSGRP00000109055	ENSSGRP00000005048	ENSSGRP00000109055	annotation not available	Serine/arginine-rich splicing factor 1B.	0.933
ENSSGRP00000005048	ENSSGRP00000110009	ENSSGRP00000005048	ENSSGRP00000110009	annotation not available	Transformer-2 protein homolog beta-like.	0.924
ENSSGRP00000005048	LOC107548478	ENSSGRP00000005048	ENSSGRP00000060439	annotation not available	Serine/arginine-rich splicing factor 7-like.	0.957
ENSSGRP00000005048	LOC107549009	ENSSGRP00000005048	ENSSGRP00000033588	annotation not available	Serine/arginine-rich splicing factor 9-like.	0.870
ENSSGRP00000005048	LOC107554282	ENSSGRP00000005048	ENSSGRP00000003025	annotation not available	Serine/arginine-rich splicing factor 1A.	0.933
ENSSGRP00000005048	LOC107560829	ENSSGRP00000005048	ENSSGRP00000037199	annotation not available	Serine/arginine-rich splicing factor 9-like.	0.870
ENSSGRP00000005048	LOC107566380	ENSSGRP00000005048	ENSSGRP00000045851	annotation not available	Serine/arginine-rich splicing factor 2-like.	0.968
ENSSGRP00000005048	LOC107569308	ENSSGRP00000005048	ENSSGRP00000071543	annotation not available	Serine/arginine-rich splicing factor 6-like isoform X1.	0.781
ENSSGRP00000005048	LOC107574816	ENSSGRP00000005048	ENSSGRP00000026131	annotation not available	Serine/arginine-rich splicing factor 10-like isoform X1.	0.777
ENSSGRP00000005048	LOC107581576	ENSSGRP00000005048	ENSSGRP00000022210	annotation not available	Serine/arginine-rich splicing factor 2-like.	0.968
ENSSGRP00000005048	LOC107582602	ENSSGRP00000005048	ENSSGRP00000026306	annotation not available	Serine/arginine-rich splicing factor 1A-like.	0.933
ENSSGRP00000005048	LOC107592988	ENSSGRP00000005048	ENSSGRP00000064539	annotation not available	Transformer-2 protein homolog beta-like isoform X1.	0.924
ENSSGRP00000005048	LOC107593614	ENSSGRP00000005048	ENSSGRP00000097890	annotation not available	Transformer-2 protein homolog alpha-like isoform X1.	0.924
ENSSGRP00000005048	LOC107596141	ENSSGRP00000005048	ENSSGRP00000068457	annotation not available	Serine/arginine-rich splicing factor 7-like isoform X1.	0.957
ENSSGRP00000005048	LOC107601991	ENSSGRP00000005048	ENSSGRP00000046077	annotation not available	Serine/arginine-rich splicing factor 10-like isoform X1.	0.777
ENSSGRP00000005048	srsf7	ENSSGRP00000005048	ENSSGRP00000048987	annotation not available	Serine/arginine-rich splicing factor 7 isoform X1.	0.957
ENSSGRP00000036265	ENSSGRP00000005048	ENSSGRP00000036265	ENSSGRP00000005048	annotation not available	annotation not available	0.777