STRINGSTRING
ENSSGRP00000001839 ENSSGRP00000001839 ENSSGRP00000002591 ENSSGRP00000002591 ENSSGRP00000003666 ENSSGRP00000003666 ENSSGRP00000007313 ENSSGRP00000007313 ENSSGRP00000011166 ENSSGRP00000011166 ENSSGRP00000047160 ENSSGRP00000047160 LOC107563557 LOC107563557 ENSSGRP00000054536 ENSSGRP00000054536 LOC107589291 LOC107589291 ENSSGRP00000069308 ENSSGRP00000069308 UPF2 UPF2 upf1 upf1 ENSSGRP00000096547 ENSSGRP00000096547 ENSSGRP00000099627 ENSSGRP00000099627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSGRP00000001839Serine/threonine-protein kinase SMG1-like isoform X1. (3624 aa)
ENSSGRP00000002591Serine/threonine-protein kinase SMG1-like. (3531 aa)
ENSSGRP00000003666SMG5 nonsense mediated mRNA decay factor. (1001 aa)
ENSSGRP00000007313Regulator of nonsense transcripts 1-like. (946 aa)
ENSSGRP00000011166Regulator of nonsense transcripts 3B-like. (119 aa)
ENSSGRP00000047160Telomerase-binding protein EST1A-like. (1548 aa)
LOC107563557Protein SMG7-like isoform X1. (1171 aa)
ENSSGRP00000054536Regulator of nonsense transcripts 3B-like. (374 aa)
LOC107589291Telomerase-binding protein EST1A-like. (1571 aa)
ENSSGRP00000069308Protein SMG7-like isoform X1. (1153 aa)
UPF2UPF2 regulator of nonsense mediated mRNA decay. (1192 aa)
upf1Regulator of nonsense transcripts 1 isoform X1. (1116 aa)
ENSSGRP00000096547SMG5 nonsense mediated mRNA decay factor. (1056 aa)
ENSSGRP00000099627annotation not available (1168 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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