(16 nodes) Deadenylation-independent decapping of nuclear-transcribed mRNA, and 5-3 exoribonuclease activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000006210	annotation not available (370 aa)
	dcp1a	MRNA-decapping enzyme 1A isoform X1. (452 aa)
	ENSSGRP00000016444	MRNA-decapping enzyme subunit 2. (379 aa)
	ENSSGRP00000023920	5'-3' exoribonuclease 1-like. (1631 aa)
	ENSSGRP00000035169	Enhancer of mRNA decapping 4. (1120 aa)
	DCP1A	MRNA-decapping enzyme 1A-like. (401 aa)
	LOC107589040	MRNA-decapping enzyme 1B-like. (499 aa)
	ENSSGRP00000068545	Decapping mRNA 2. (235 aa)
	LOC107556773	DNA topoisomerase 2-associated protein PAT1. (719 aa)
	LOC107595651	Probable ATP-dependent RNA helicase ddx6. (483 aa)
	ENSSGRP00000082494	5'-3' exoribonuclease 1. (1677 aa)
	LOC107590561	MRNA-decapping enzyme 1B-like. (517 aa)
	edc3	Enhancer of mRNA-decapping protein 3 isoform X1. (501 aa)
	edc4	Enhancer of mRNA-decapping protein 4 isoform X1. (1392 aa)
	LOC107554805	YjeF N-terminal domain-containing protein 3-like. (255 aa)
	LOC107551853	DNA topoisomerase 2-associated protein PAT1. (707 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCP1A	ENSSGRP00000016444	ENSSGRP00000041926	ENSSGRP00000016444	MRNA-decapping enzyme 1A-like.	MRNA-decapping enzyme subunit 2.	0.975
DCP1A	ENSSGRP00000023920	ENSSGRP00000041926	ENSSGRP00000023920	MRNA-decapping enzyme 1A-like.	5'-3' exoribonuclease 1-like.	0.972
DCP1A	ENSSGRP00000035169	ENSSGRP00000041926	ENSSGRP00000035169	MRNA-decapping enzyme 1A-like.	Enhancer of mRNA decapping 4.	0.969
DCP1A	ENSSGRP00000068545	ENSSGRP00000041926	ENSSGRP00000068545	MRNA-decapping enzyme 1A-like.	Decapping mRNA 2.	0.975
DCP1A	ENSSGRP00000082494	ENSSGRP00000041926	ENSSGRP00000082494	MRNA-decapping enzyme 1A-like.	5'-3' exoribonuclease 1.	0.972
DCP1A	LOC107551853	ENSSGRP00000041926	ENSSGRP00000104525	MRNA-decapping enzyme 1A-like.	DNA topoisomerase 2-associated protein PAT1.	0.908
DCP1A	LOC107554805	ENSSGRP00000041926	ENSSGRP00000101691	MRNA-decapping enzyme 1A-like.	YjeF N-terminal domain-containing protein 3-like.	0.880
DCP1A	LOC107556773	ENSSGRP00000041926	ENSSGRP00000072059	MRNA-decapping enzyme 1A-like.	DNA topoisomerase 2-associated protein PAT1.	0.908
DCP1A	LOC107589040	ENSSGRP00000041926	ENSSGRP00000055264	MRNA-decapping enzyme 1A-like.	MRNA-decapping enzyme 1B-like.	0.906
DCP1A	LOC107590561	ENSSGRP00000041926	ENSSGRP00000082511	MRNA-decapping enzyme 1A-like.	MRNA-decapping enzyme 1B-like.	0.905
DCP1A	LOC107595651	ENSSGRP00000041926	ENSSGRP00000081298	MRNA-decapping enzyme 1A-like.	Probable ATP-dependent RNA helicase ddx6.	0.891
DCP1A	edc3	ENSSGRP00000041926	ENSSGRP00000098266	MRNA-decapping enzyme 1A-like.	Enhancer of mRNA-decapping protein 3 isoform X1.	0.989
DCP1A	edc4	ENSSGRP00000041926	ENSSGRP00000099579	MRNA-decapping enzyme 1A-like.	Enhancer of mRNA-decapping protein 4 isoform X1.	0.969
ENSSGRP00000006210	ENSSGRP00000016444	ENSSGRP00000006210	ENSSGRP00000016444	annotation not available	MRNA-decapping enzyme subunit 2.	0.975
ENSSGRP00000006210	ENSSGRP00000023920	ENSSGRP00000006210	ENSSGRP00000023920	annotation not available	5'-3' exoribonuclease 1-like.	0.972
ENSSGRP00000006210	ENSSGRP00000035169	ENSSGRP00000006210	ENSSGRP00000035169	annotation not available	Enhancer of mRNA decapping 4.	0.969
ENSSGRP00000006210	ENSSGRP00000068545	ENSSGRP00000006210	ENSSGRP00000068545	annotation not available	Decapping mRNA 2.	0.975
ENSSGRP00000006210	ENSSGRP00000082494	ENSSGRP00000006210	ENSSGRP00000082494	annotation not available	5'-3' exoribonuclease 1.	0.972
ENSSGRP00000006210	LOC107551853	ENSSGRP00000006210	ENSSGRP00000104525	annotation not available	DNA topoisomerase 2-associated protein PAT1.	0.908
ENSSGRP00000006210	LOC107554805	ENSSGRP00000006210	ENSSGRP00000101691	annotation not available	YjeF N-terminal domain-containing protein 3-like.	0.880