(10 nodes) Domain in DAP-5, eIF4G, MA-3 and other proteins., and RNA strand-exchange activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107585139	Eukaryotic translation initiation factor 4B-like isoform X1. (609 aa)
	ENSSGRP00000032343	Eukaryotic translation initiation factor 4B-like. (202 aa)
	ENSSGRP00000032558	Eukaryotic translation initiation factor 4 gamma 3-like. (1664 aa)
	LOC107568626	Eukaryotic initiation factor 4A-II. (411 aa)
	LOC107553015	Eukaryotic translation initiation factor 4 gamma 2-like. (906 aa)
	LOC107583809	Eukaryotic translation initiation factor 4 gamma 2-like. (934 aa)
	ENSSGRP00000075406	Eukaryotic initiation factor 4A-I-like. (444 aa)
	LOC107570449	Eukaryotic translation initiation factor 4E-1A-like. (225 aa)
	LOC107582514	Eukaryotic translation initiation factor 4E-like isoform X1. (229 aa)
	ENSSGRP00000109929	Eukaryotic translation initiation factor 4 gamma 3-like. (1589 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000032343	ENSSGRP00000032558	ENSSGRP00000032343	ENSSGRP00000032558	Eukaryotic translation initiation factor 4B-like.	Eukaryotic translation initiation factor 4 gamma 3-like.	0.717
ENSSGRP00000032343	ENSSGRP00000075406	ENSSGRP00000032343	ENSSGRP00000075406	Eukaryotic translation initiation factor 4B-like.	Eukaryotic initiation factor 4A-I-like.	0.984
ENSSGRP00000032343	ENSSGRP00000109929	ENSSGRP00000032343	ENSSGRP00000109929	Eukaryotic translation initiation factor 4B-like.	Eukaryotic translation initiation factor 4 gamma 3-like.	0.717
ENSSGRP00000032343	LOC107553015	ENSSGRP00000032343	ENSSGRP00000056526	Eukaryotic translation initiation factor 4B-like.	Eukaryotic translation initiation factor 4 gamma 2-like.	0.690
ENSSGRP00000032343	LOC107568626	ENSSGRP00000032343	ENSSGRP00000054007	Eukaryotic translation initiation factor 4B-like.	Eukaryotic initiation factor 4A-II.	0.984
ENSSGRP00000032343	LOC107570449	ENSSGRP00000032343	ENSSGRP00000080178	Eukaryotic translation initiation factor 4B-like.	Eukaryotic translation initiation factor 4E-1A-like.	0.744
ENSSGRP00000032343	LOC107582514	ENSSGRP00000032343	ENSSGRP00000096203	Eukaryotic translation initiation factor 4B-like.	Eukaryotic translation initiation factor 4E-like isoform X1.	0.718
ENSSGRP00000032343	LOC107583809	ENSSGRP00000032343	ENSSGRP00000067592	Eukaryotic translation initiation factor 4B-like.	Eukaryotic translation initiation factor 4 gamma 2-like.	0.690
ENSSGRP00000032558	ENSSGRP00000032343	ENSSGRP00000032558	ENSSGRP00000032343	Eukaryotic translation initiation factor 4 gamma 3-like.	Eukaryotic translation initiation factor 4B-like.	0.717
ENSSGRP00000032558	ENSSGRP00000075406	ENSSGRP00000032558	ENSSGRP00000075406	Eukaryotic translation initiation factor 4 gamma 3-like.	Eukaryotic initiation factor 4A-I-like.	0.953
ENSSGRP00000032558	LOC107568626	ENSSGRP00000032558	ENSSGRP00000054007	Eukaryotic translation initiation factor 4 gamma 3-like.	Eukaryotic initiation factor 4A-II.	0.944
ENSSGRP00000032558	LOC107570449	ENSSGRP00000032558	ENSSGRP00000080178	Eukaryotic translation initiation factor 4 gamma 3-like.	Eukaryotic translation initiation factor 4E-1A-like.	0.913
ENSSGRP00000032558	LOC107582514	ENSSGRP00000032558	ENSSGRP00000096203	Eukaryotic translation initiation factor 4 gamma 3-like.	Eukaryotic translation initiation factor 4E-like isoform X1.	0.907
ENSSGRP00000032558	LOC107585139	ENSSGRP00000032558	ENSSGRP00000008008	Eukaryotic translation initiation factor 4 gamma 3-like.	Eukaryotic translation initiation factor 4B-like isoform X1.	0.717
ENSSGRP00000075406	ENSSGRP00000032343	ENSSGRP00000075406	ENSSGRP00000032343	Eukaryotic initiation factor 4A-I-like.	Eukaryotic translation initiation factor 4B-like.	0.984
ENSSGRP00000075406	ENSSGRP00000032558	ENSSGRP00000075406	ENSSGRP00000032558	Eukaryotic initiation factor 4A-I-like.	Eukaryotic translation initiation factor 4 gamma 3-like.	0.953
ENSSGRP00000075406	ENSSGRP00000109929	ENSSGRP00000075406	ENSSGRP00000109929	Eukaryotic initiation factor 4A-I-like.	Eukaryotic translation initiation factor 4 gamma 3-like.	0.953
ENSSGRP00000075406	LOC107553015	ENSSGRP00000075406	ENSSGRP00000056526	Eukaryotic initiation factor 4A-I-like.	Eukaryotic translation initiation factor 4 gamma 2-like.	0.957
ENSSGRP00000075406	LOC107568626	ENSSGRP00000075406	ENSSGRP00000054007	Eukaryotic initiation factor 4A-I-like.	Eukaryotic initiation factor 4A-II.	0.900
ENSSGRP00000075406	LOC107570449	ENSSGRP00000075406	ENSSGRP00000080178	Eukaryotic initiation factor 4A-I-like.	Eukaryotic translation initiation factor 4E-1A-like.	0.872