(5 nodes) Pi-body network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107561271	Piwi-like protein 2. (1046 aa)
	ENSSGRP00000003546	Tudor domain containing 12. (1311 aa)
	LOC107581549	Tudor domain-containing protein 1/4/6/7. (1185 aa)
	LOC107583750	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1. (479 aa)
	ENSSGRP00000043832	Uncharacterized protein LOC107577482. (476 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000003546	ENSSGRP00000043832	ENSSGRP00000003546	ENSSGRP00000043832	Tudor domain containing 12.	Uncharacterized protein LOC107577482.	0.632
ENSSGRP00000003546	LOC107561271	ENSSGRP00000003546	ENSSGRP00000001374	Tudor domain containing 12.	Piwi-like protein 2.	0.775
ENSSGRP00000003546	LOC107581549	ENSSGRP00000003546	ENSSGRP00000013538	Tudor domain containing 12.	Tudor domain-containing protein 1/4/6/7.	0.724
ENSSGRP00000003546	LOC107583750	ENSSGRP00000003546	ENSSGRP00000038148	Tudor domain containing 12.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	0.718
ENSSGRP00000043832	ENSSGRP00000003546	ENSSGRP00000043832	ENSSGRP00000003546	Uncharacterized protein LOC107577482.	Tudor domain containing 12.	0.632
ENSSGRP00000043832	LOC107561271	ENSSGRP00000043832	ENSSGRP00000001374	Uncharacterized protein LOC107577482.	Piwi-like protein 2.	0.854
ENSSGRP00000043832	LOC107581549	ENSSGRP00000043832	ENSSGRP00000013538	Uncharacterized protein LOC107577482.	Tudor domain-containing protein 1/4/6/7.	0.582
ENSSGRP00000043832	LOC107583750	ENSSGRP00000043832	ENSSGRP00000038148	Uncharacterized protein LOC107577482.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	0.676
LOC107561271	ENSSGRP00000003546	ENSSGRP00000001374	ENSSGRP00000003546	Piwi-like protein 2.	Tudor domain containing 12.	0.775
LOC107561271	ENSSGRP00000043832	ENSSGRP00000001374	ENSSGRP00000043832	Piwi-like protein 2.	Uncharacterized protein LOC107577482.	0.854
LOC107561271	LOC107581549	ENSSGRP00000001374	ENSSGRP00000013538	Piwi-like protein 2.	Tudor domain-containing protein 1/4/6/7.	0.932
LOC107561271	LOC107583750	ENSSGRP00000001374	ENSSGRP00000038148	Piwi-like protein 2.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	0.798
LOC107581549	ENSSGRP00000003546	ENSSGRP00000013538	ENSSGRP00000003546	Tudor domain-containing protein 1/4/6/7.	Tudor domain containing 12.	0.724
LOC107581549	ENSSGRP00000043832	ENSSGRP00000013538	ENSSGRP00000043832	Tudor domain-containing protein 1/4/6/7.	Uncharacterized protein LOC107577482.	0.582
LOC107581549	LOC107561271	ENSSGRP00000013538	ENSSGRP00000001374	Tudor domain-containing protein 1/4/6/7.	Piwi-like protein 2.	0.932
LOC107581549	LOC107583750	ENSSGRP00000013538	ENSSGRP00000038148	Tudor domain-containing protein 1/4/6/7.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	0.756
LOC107583750	ENSSGRP00000003546	ENSSGRP00000038148	ENSSGRP00000003546	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	Tudor domain containing 12.	0.718
LOC107583750	ENSSGRP00000043832	ENSSGRP00000038148	ENSSGRP00000043832	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	Uncharacterized protein LOC107577482.	0.676
LOC107583750	LOC107561271	ENSSGRP00000038148	ENSSGRP00000001374	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	Piwi-like protein 2.	0.798
LOC107583750	LOC107581549	ENSSGRP00000038148	ENSSGRP00000013538	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1-like isoform X1.	Tudor domain-containing protein 1/4/6/7.	0.756