(5 nodes) Signal transduction downstream of smoothened, and Kinesin motor, catalytic domain. ATPase. network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000015281	annotation not available (247 aa)
	ENSSGRP00000015614	Transcriptional activator GLI3-like. (1599 aa)
	ENSSGRP00000018411	Zinc finger protein GLI2-like isoform X1. (1456 aa)
	kif7	Kinesin-like protein KIF7 isoform X1. (1363 aa)
	ENSSGRP00000102906	Kinesin family member 21B. (1592 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000015281	ENSSGRP00000015614	ENSSGRP00000015281	ENSSGRP00000015614	annotation not available	Transcriptional activator GLI3-like.	0.750
ENSSGRP00000015281	ENSSGRP00000018411	ENSSGRP00000015281	ENSSGRP00000018411	annotation not available	Zinc finger protein GLI2-like isoform X1.	0.750
ENSSGRP00000015281	ENSSGRP00000102906	ENSSGRP00000015281	ENSSGRP00000102906	annotation not available	Kinesin family member 21B.	0.965
ENSSGRP00000015281	kif7	ENSSGRP00000015281	ENSSGRP00000080394	annotation not available	Kinesin-like protein KIF7 isoform X1.	0.973
ENSSGRP00000015614	ENSSGRP00000015281	ENSSGRP00000015614	ENSSGRP00000015281	Transcriptional activator GLI3-like.	annotation not available	0.750
ENSSGRP00000015614	ENSSGRP00000102906	ENSSGRP00000015614	ENSSGRP00000102906	Transcriptional activator GLI3-like.	Kinesin family member 21B.	0.779
ENSSGRP00000015614	kif7	ENSSGRP00000015614	ENSSGRP00000080394	Transcriptional activator GLI3-like.	Kinesin-like protein KIF7 isoform X1.	0.894
ENSSGRP00000018411	ENSSGRP00000015281	ENSSGRP00000018411	ENSSGRP00000015281	Zinc finger protein GLI2-like isoform X1.	annotation not available	0.750
ENSSGRP00000018411	ENSSGRP00000102906	ENSSGRP00000018411	ENSSGRP00000102906	Zinc finger protein GLI2-like isoform X1.	Kinesin family member 21B.	0.779
ENSSGRP00000018411	kif7	ENSSGRP00000018411	ENSSGRP00000080394	Zinc finger protein GLI2-like isoform X1.	Kinesin-like protein KIF7 isoform X1.	0.989
ENSSGRP00000102906	ENSSGRP00000015281	ENSSGRP00000102906	ENSSGRP00000015281	Kinesin family member 21B.	annotation not available	0.965
ENSSGRP00000102906	ENSSGRP00000015614	ENSSGRP00000102906	ENSSGRP00000015614	Kinesin family member 21B.	Transcriptional activator GLI3-like.	0.779
ENSSGRP00000102906	ENSSGRP00000018411	ENSSGRP00000102906	ENSSGRP00000018411	Kinesin family member 21B.	Zinc finger protein GLI2-like isoform X1.	0.779
ENSSGRP00000102906	kif7	ENSSGRP00000102906	ENSSGRP00000080394	Kinesin family member 21B.	Kinesin-like protein KIF7 isoform X1.	0.445
kif7	ENSSGRP00000015281	ENSSGRP00000080394	ENSSGRP00000015281	Kinesin-like protein KIF7 isoform X1.	annotation not available	0.973
kif7	ENSSGRP00000015614	ENSSGRP00000080394	ENSSGRP00000015614	Kinesin-like protein KIF7 isoform X1.	Transcriptional activator GLI3-like.	0.894
kif7	ENSSGRP00000018411	ENSSGRP00000080394	ENSSGRP00000018411	Kinesin-like protein KIF7 isoform X1.	Zinc finger protein GLI2-like isoform X1.	0.989
kif7	ENSSGRP00000102906	ENSSGRP00000080394	ENSSGRP00000102906	Kinesin-like protein KIF7 isoform X1.	Kinesin family member 21B.	0.445