(10 nodes) Mixed, incl. Glycogen synthase, and Alpha amylase, C-terminal all-beta domain network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000008538	Glucan (1,4-alpha-), branching enzyme 1a. (442 aa)
	ENSSGRP00000016415	Glycogenin 2. (238 aa)
	ENSSGRP00000016574	Glycogen [starch] synthase, muscle-like. (689 aa)
	ENSSGRP00000017614	annotation not available (671 aa)
	ENSSGRP00000043567	Glycogen [starch] synthase, liver-like. (584 aa)
	ENSSGRP00000071101	Glycogenin 1b. (302 aa)
	ENSSGRP00000079328	Glucan (1,4-alpha-), branching enzyme 1a. (625 aa)
	ENSSGRP00000092426	Phosphorylase, glycogen, muscle b. (655 aa)
	ENSSGRP00000095140	Phosphoglucomutase 5. (385 aa)
	ENSSGRP00000108292	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a. (1518 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSSGRP00000008538	ENSSGRP00000016415	Glucan (1,4-alpha-), branching enzyme 1a.	Glycogenin 2.	0.851
ENSSGRP00000008538	ENSSGRP00000016574	Glucan (1,4-alpha-), branching enzyme 1a.	Glycogen [starch] synthase, muscle-like.	0.957
ENSSGRP00000008538	ENSSGRP00000017614	Glucan (1,4-alpha-), branching enzyme 1a.	annotation not available	0.877
ENSSGRP00000008538	ENSSGRP00000043567	Glucan (1,4-alpha-), branching enzyme 1a.	Glycogen [starch] synthase, liver-like.	0.957
ENSSGRP00000008538	ENSSGRP00000071101	Glucan (1,4-alpha-), branching enzyme 1a.	Glycogenin 1b.	0.861
ENSSGRP00000008538	ENSSGRP00000092426	Glucan (1,4-alpha-), branching enzyme 1a.	Phosphorylase, glycogen, muscle b.	0.877
ENSSGRP00000008538	ENSSGRP00000095140	Glucan (1,4-alpha-), branching enzyme 1a.	Phosphoglucomutase 5.	0.817
ENSSGRP00000008538	ENSSGRP00000108292	Glucan (1,4-alpha-), branching enzyme 1a.	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a.	0.742
ENSSGRP00000016415	ENSSGRP00000008538	Glycogenin 2.	Glucan (1,4-alpha-), branching enzyme 1a.	0.851
ENSSGRP00000016415	ENSSGRP00000016574	Glycogenin 2.	Glycogen [starch] synthase, muscle-like.	0.915
ENSSGRP00000016415	ENSSGRP00000017614	Glycogenin 2.	annotation not available	0.609
ENSSGRP00000016415	ENSSGRP00000043567	Glycogenin 2.	Glycogen [starch] synthase, liver-like.	0.915
ENSSGRP00000016415	ENSSGRP00000079328	Glycogenin 2.	Glucan (1,4-alpha-), branching enzyme 1a.	0.851
ENSSGRP00000016415	ENSSGRP00000092426	Glycogenin 2.	Phosphorylase, glycogen, muscle b.	0.609
ENSSGRP00000016415	ENSSGRP00000108292	Glycogenin 2.	Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a.	0.735
ENSSGRP00000016574	ENSSGRP00000008538	Glycogen [starch] synthase, muscle-like.	Glucan (1,4-alpha-), branching enzyme 1a.	0.957
ENSSGRP00000016574	ENSSGRP00000016415	Glycogen [starch] synthase, muscle-like.	Glycogenin 2.	0.915
ENSSGRP00000016574	ENSSGRP00000017614	Glycogen [starch] synthase, muscle-like.	annotation not available	0.747
ENSSGRP00000016574	ENSSGRP00000071101	Glycogen [starch] synthase, muscle-like.	Glycogenin 1b.	0.915
ENSSGRP00000016574	ENSSGRP00000079328	Glycogen [starch] synthase, muscle-like.	Glucan (1,4-alpha-), branching enzyme 1a.	0.957