(5 nodes) Nuclear pore inner ring, and Nup93/Nic96 network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000025381	Nuclear pore complex protein Nup205-like. (1402 aa)
	LOC107549634	Nuclear pore complex protein Nup93 isoform X1. (859 aa)
	ENSSGRP00000067164	E3 SUMO-protein ligase RanBP2-like. (169 aa)
	ENSSGRP00000076806	Nuclear pore complex protein Nup155-like. (55 aa)
	ENSSGRP00000092777	Nuclear pore complex protein Nup188. (1700 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000025381	ENSSGRP00000067164	ENSSGRP00000025381	ENSSGRP00000067164	Nuclear pore complex protein Nup205-like.	E3 SUMO-protein ligase RanBP2-like.	0.994
ENSSGRP00000025381	ENSSGRP00000076806	ENSSGRP00000025381	ENSSGRP00000076806	Nuclear pore complex protein Nup205-like.	Nuclear pore complex protein Nup155-like.	0.995
ENSSGRP00000025381	ENSSGRP00000092777	ENSSGRP00000025381	ENSSGRP00000092777	Nuclear pore complex protein Nup205-like.	Nuclear pore complex protein Nup188.	0.997
ENSSGRP00000025381	LOC107549634	ENSSGRP00000025381	ENSSGRP00000051753	Nuclear pore complex protein Nup205-like.	Nuclear pore complex protein Nup93 isoform X1.	0.998
ENSSGRP00000067164	ENSSGRP00000025381	ENSSGRP00000067164	ENSSGRP00000025381	E3 SUMO-protein ligase RanBP2-like.	Nuclear pore complex protein Nup205-like.	0.994
ENSSGRP00000067164	ENSSGRP00000076806	ENSSGRP00000067164	ENSSGRP00000076806	E3 SUMO-protein ligase RanBP2-like.	Nuclear pore complex protein Nup155-like.	0.999
ENSSGRP00000067164	ENSSGRP00000092777	ENSSGRP00000067164	ENSSGRP00000092777	E3 SUMO-protein ligase RanBP2-like.	Nuclear pore complex protein Nup188.	0.989
ENSSGRP00000067164	LOC107549634	ENSSGRP00000067164	ENSSGRP00000051753	E3 SUMO-protein ligase RanBP2-like.	Nuclear pore complex protein Nup93 isoform X1.	0.999
ENSSGRP00000076806	ENSSGRP00000025381	ENSSGRP00000076806	ENSSGRP00000025381	Nuclear pore complex protein Nup155-like.	Nuclear pore complex protein Nup205-like.	0.995
ENSSGRP00000076806	ENSSGRP00000067164	ENSSGRP00000076806	ENSSGRP00000067164	Nuclear pore complex protein Nup155-like.	E3 SUMO-protein ligase RanBP2-like.	0.999
ENSSGRP00000076806	ENSSGRP00000092777	ENSSGRP00000076806	ENSSGRP00000092777	Nuclear pore complex protein Nup155-like.	Nuclear pore complex protein Nup188.	0.998
ENSSGRP00000076806	LOC107549634	ENSSGRP00000076806	ENSSGRP00000051753	Nuclear pore complex protein Nup155-like.	Nuclear pore complex protein Nup93 isoform X1.	0.997
ENSSGRP00000092777	ENSSGRP00000025381	ENSSGRP00000092777	ENSSGRP00000025381	Nuclear pore complex protein Nup188.	Nuclear pore complex protein Nup205-like.	0.997
ENSSGRP00000092777	ENSSGRP00000067164	ENSSGRP00000092777	ENSSGRP00000067164	Nuclear pore complex protein Nup188.	E3 SUMO-protein ligase RanBP2-like.	0.989
ENSSGRP00000092777	ENSSGRP00000076806	ENSSGRP00000092777	ENSSGRP00000076806	Nuclear pore complex protein Nup188.	Nuclear pore complex protein Nup155-like.	0.998
ENSSGRP00000092777	LOC107549634	ENSSGRP00000092777	ENSSGRP00000051753	Nuclear pore complex protein Nup188.	Nuclear pore complex protein Nup93 isoform X1.	0.999
LOC107549634	ENSSGRP00000025381	ENSSGRP00000051753	ENSSGRP00000025381	Nuclear pore complex protein Nup93 isoform X1.	Nuclear pore complex protein Nup205-like.	0.998
LOC107549634	ENSSGRP00000067164	ENSSGRP00000051753	ENSSGRP00000067164	Nuclear pore complex protein Nup93 isoform X1.	E3 SUMO-protein ligase RanBP2-like.	0.999
LOC107549634	ENSSGRP00000076806	ENSSGRP00000051753	ENSSGRP00000076806	Nuclear pore complex protein Nup93 isoform X1.	Nuclear pore complex protein Nup155-like.	0.997
LOC107549634	ENSSGRP00000092777	ENSSGRP00000051753	ENSSGRP00000092777	Nuclear pore complex protein Nup93 isoform X1.	Nuclear pore complex protein Nup188.	0.999