(6 nodes) TIM22 mitochondrial import inner membrane insertion complex, and Tim10/DDP family zinc finger network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107595490	Mitochondrial import inner membrane translocase subunit Tim22-like. (196 aa)
	ENSSGRP00000038333	Acylglycerol kinase. (353 aa)
	ENSSGRP00000061725	annotation not available (88 aa)
	LOC107601237	Uncharacterized protein C19orf52-like isoform X1. (256 aa)
	LOC107556822	Mitochondrial import inner membrane translocase subunit Tim10-like. (88 aa)
	ENSSGRP00000087472	annotation not available (41 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000038333	ENSSGRP00000061725	ENSSGRP00000038333	ENSSGRP00000061725	Acylglycerol kinase.	annotation not available	0.878
ENSSGRP00000038333	ENSSGRP00000087472	ENSSGRP00000038333	ENSSGRP00000087472	Acylglycerol kinase.	annotation not available	0.896
ENSSGRP00000038333	LOC107556822	ENSSGRP00000038333	ENSSGRP00000072772	Acylglycerol kinase.	Mitochondrial import inner membrane translocase subunit Tim10-like.	0.877
ENSSGRP00000038333	LOC107595490	ENSSGRP00000038333	ENSSGRP00000013748	Acylglycerol kinase.	Mitochondrial import inner membrane translocase subunit Tim22-like.	0.824
ENSSGRP00000038333	LOC107601237	ENSSGRP00000038333	ENSSGRP00000063081	Acylglycerol kinase.	Uncharacterized protein C19orf52-like isoform X1.	0.933
ENSSGRP00000061725	ENSSGRP00000038333	ENSSGRP00000061725	ENSSGRP00000038333	annotation not available	Acylglycerol kinase.	0.878
ENSSGRP00000061725	ENSSGRP00000087472	ENSSGRP00000061725	ENSSGRP00000087472	annotation not available	annotation not available	0.932
ENSSGRP00000061725	LOC107556822	ENSSGRP00000061725	ENSSGRP00000072772	annotation not available	Mitochondrial import inner membrane translocase subunit Tim10-like.	0.997
ENSSGRP00000061725	LOC107595490	ENSSGRP00000061725	ENSSGRP00000013748	annotation not available	Mitochondrial import inner membrane translocase subunit Tim22-like.	0.982
ENSSGRP00000061725	LOC107601237	ENSSGRP00000061725	ENSSGRP00000063081	annotation not available	Uncharacterized protein C19orf52-like isoform X1.	0.876
ENSSGRP00000087472	ENSSGRP00000038333	ENSSGRP00000087472	ENSSGRP00000038333	annotation not available	Acylglycerol kinase.	0.896
ENSSGRP00000087472	ENSSGRP00000061725	ENSSGRP00000087472	ENSSGRP00000061725	annotation not available	annotation not available	0.932
ENSSGRP00000087472	LOC107556822	ENSSGRP00000087472	ENSSGRP00000072772	annotation not available	Mitochondrial import inner membrane translocase subunit Tim10-like.	0.993
ENSSGRP00000087472	LOC107595490	ENSSGRP00000087472	ENSSGRP00000013748	annotation not available	Mitochondrial import inner membrane translocase subunit Tim22-like.	0.935
ENSSGRP00000087472	LOC107601237	ENSSGRP00000087472	ENSSGRP00000063081	annotation not available	Uncharacterized protein C19orf52-like isoform X1.	0.866
LOC107556822	ENSSGRP00000038333	ENSSGRP00000072772	ENSSGRP00000038333	Mitochondrial import inner membrane translocase subunit Tim10-like.	Acylglycerol kinase.	0.877
LOC107556822	ENSSGRP00000061725	ENSSGRP00000072772	ENSSGRP00000061725	Mitochondrial import inner membrane translocase subunit Tim10-like.	annotation not available	0.997
LOC107556822	ENSSGRP00000087472	ENSSGRP00000072772	ENSSGRP00000087472	Mitochondrial import inner membrane translocase subunit Tim10-like.	annotation not available	0.993
LOC107556822	LOC107595490	ENSSGRP00000072772	ENSSGRP00000013748	Mitochondrial import inner membrane translocase subunit Tim10-like.	Mitochondrial import inner membrane translocase subunit Tim22-like.	0.990
LOC107556822	LOC107601237	ENSSGRP00000072772	ENSSGRP00000063081	Mitochondrial import inner membrane translocase subunit Tim10-like.	Uncharacterized protein C19orf52-like isoform X1.	0.925