(7 nodes) Mixed, incl. Diacylglycerol cholinephosphotransferase activity, and Sterol esterification network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pemt	Phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase. (262 aa)
	ENSSGRP00000041756	HRAS-like suppressor 3. (205 aa)
	lcat	Phosphatidylcholine-sterol acyltransferase. (438 aa)
	LOC107598985	Choline/ethanolaminephosphotransferase 1-like. (426 aa)
	LOC107590206	Diacylglycerol cholinephosphotransferase. (409 aa)
	ENSSGRP00000088569	Phosphatidylserine synthase 1-like isoform X1. (483 aa)
	LOC107550865	HRAS-like suppressor 3. (169 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000041756	ENSSGRP00000088569	ENSSGRP00000041756	ENSSGRP00000088569	HRAS-like suppressor 3.	Phosphatidylserine synthase 1-like isoform X1.	0.900
ENSSGRP00000041756	LOC107550865	ENSSGRP00000041756	ENSSGRP00000112400	HRAS-like suppressor 3.	HRAS-like suppressor 3.	0.656
ENSSGRP00000041756	LOC107590206	ENSSGRP00000041756	ENSSGRP00000074678	HRAS-like suppressor 3.	Diacylglycerol cholinephosphotransferase.	0.906
ENSSGRP00000041756	LOC107598985	ENSSGRP00000041756	ENSSGRP00000056380	HRAS-like suppressor 3.	Choline/ethanolaminephosphotransferase 1-like.	0.904
ENSSGRP00000041756	lcat	ENSSGRP00000041756	ENSSGRP00000050852	HRAS-like suppressor 3.	Phosphatidylcholine-sterol acyltransferase.	0.912
ENSSGRP00000041756	pemt	ENSSGRP00000041756	ENSSGRP00000032268	HRAS-like suppressor 3.	Phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase.	0.900
ENSSGRP00000088569	ENSSGRP00000041756	ENSSGRP00000088569	ENSSGRP00000041756	Phosphatidylserine synthase 1-like isoform X1.	HRAS-like suppressor 3.	0.900
ENSSGRP00000088569	LOC107550865	ENSSGRP00000088569	ENSSGRP00000112400	Phosphatidylserine synthase 1-like isoform X1.	HRAS-like suppressor 3.	0.900
ENSSGRP00000088569	LOC107590206	ENSSGRP00000088569	ENSSGRP00000074678	Phosphatidylserine synthase 1-like isoform X1.	Diacylglycerol cholinephosphotransferase.	0.937
ENSSGRP00000088569	LOC107598985	ENSSGRP00000088569	ENSSGRP00000056380	Phosphatidylserine synthase 1-like isoform X1.	Choline/ethanolaminephosphotransferase 1-like.	0.934
ENSSGRP00000088569	lcat	ENSSGRP00000088569	ENSSGRP00000050852	Phosphatidylserine synthase 1-like isoform X1.	Phosphatidylcholine-sterol acyltransferase.	0.900
ENSSGRP00000088569	pemt	ENSSGRP00000088569	ENSSGRP00000032268	Phosphatidylserine synthase 1-like isoform X1.	Phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase.	0.923
LOC107550865	ENSSGRP00000041756	ENSSGRP00000112400	ENSSGRP00000041756	HRAS-like suppressor 3.	HRAS-like suppressor 3.	0.656
LOC107550865	ENSSGRP00000088569	ENSSGRP00000112400	ENSSGRP00000088569	HRAS-like suppressor 3.	Phosphatidylserine synthase 1-like isoform X1.	0.900
LOC107550865	LOC107590206	ENSSGRP00000112400	ENSSGRP00000074678	HRAS-like suppressor 3.	Diacylglycerol cholinephosphotransferase.	0.906
LOC107550865	LOC107598985	ENSSGRP00000112400	ENSSGRP00000056380	HRAS-like suppressor 3.	Choline/ethanolaminephosphotransferase 1-like.	0.904
LOC107550865	lcat	ENSSGRP00000112400	ENSSGRP00000050852	HRAS-like suppressor 3.	Phosphatidylcholine-sterol acyltransferase.	0.912
LOC107550865	pemt	ENSSGRP00000112400	ENSSGRP00000032268	HRAS-like suppressor 3.	Phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase.	0.900
LOC107590206	ENSSGRP00000041756	ENSSGRP00000074678	ENSSGRP00000041756	Diacylglycerol cholinephosphotransferase.	HRAS-like suppressor 3.	0.906
LOC107590206	ENSSGRP00000088569	ENSSGRP00000074678	ENSSGRP00000088569	Diacylglycerol cholinephosphotransferase.	Phosphatidylserine synthase 1-like isoform X1.	0.937