(12 nodes) Mixed, incl. CRM1 C terminal, and Importin-beta N-terminal domain network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107597108	Regulator of chromosome condensation-like isoform X1. (419 aa)
	ENSSGRP00000009671	Exportin-1-like. (1036 aa)
	ENSSGRP00000014507	Exportin-1. (1081 aa)
	ENSSGRP00000029991	Adhesion G-protein coupled receptor D1-like. (240 aa)
	ENSSGRP00000030082	Adhesion G-protein coupled receptor D1-like. (240 aa)
	ENSSGRP00000034502	RANBP2-like and GRIP domain-containing protein 5/6. (1591 aa)
	LOC107570969	Importin subunit beta-1-like. (946 aa)
	LOC107573070	Importin subunit beta-1. (987 aa)
	LOC107560007	Snurportin-1-like isoform X1. (372 aa)
	rangap1	Ran GTPase activating protein 1. (577 aa)
	ENSSGRP00000090562	Exportin-1-like. (1011 aa)
	ENSSGRP00000108074	Ran-specific GTPase-activating protein-like. (195 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000009671	ENSSGRP00000014507	ENSSGRP00000009671	ENSSGRP00000014507	Exportin-1-like.	Exportin-1.	0.900
ENSSGRP00000009671	ENSSGRP00000029991	ENSSGRP00000009671	ENSSGRP00000029991	Exportin-1-like.	Adhesion G-protein coupled receptor D1-like.	0.915
ENSSGRP00000009671	ENSSGRP00000030082	ENSSGRP00000009671	ENSSGRP00000030082	Exportin-1-like.	Adhesion G-protein coupled receptor D1-like.	0.915
ENSSGRP00000009671	ENSSGRP00000034502	ENSSGRP00000009671	ENSSGRP00000034502	Exportin-1-like.	RANBP2-like and GRIP domain-containing protein 5/6.	0.889
ENSSGRP00000009671	ENSSGRP00000090562	ENSSGRP00000009671	ENSSGRP00000090562	Exportin-1-like.	Exportin-1-like.	0.900
ENSSGRP00000009671	ENSSGRP00000108074	ENSSGRP00000009671	ENSSGRP00000108074	Exportin-1-like.	Ran-specific GTPase-activating protein-like.	0.889
ENSSGRP00000009671	LOC107560007	ENSSGRP00000009671	ENSSGRP00000065424	Exportin-1-like.	Snurportin-1-like isoform X1.	0.923
ENSSGRP00000009671	LOC107570969	ENSSGRP00000009671	ENSSGRP00000037592	Exportin-1-like.	Importin subunit beta-1-like.	0.660
ENSSGRP00000009671	LOC107573070	ENSSGRP00000009671	ENSSGRP00000057659	Exportin-1-like.	Importin subunit beta-1.	0.660
ENSSGRP00000009671	LOC107597108	ENSSGRP00000009671	ENSSGRP00000003726	Exportin-1-like.	Regulator of chromosome condensation-like isoform X1.	0.689
ENSSGRP00000009671	rangap1	ENSSGRP00000009671	ENSSGRP00000089822	Exportin-1-like.	Ran GTPase activating protein 1.	0.755
ENSSGRP00000014507	ENSSGRP00000009671	ENSSGRP00000014507	ENSSGRP00000009671	Exportin-1.	Exportin-1-like.	0.900
ENSSGRP00000014507	ENSSGRP00000029991	ENSSGRP00000014507	ENSSGRP00000029991	Exportin-1.	Adhesion G-protein coupled receptor D1-like.	0.915
ENSSGRP00000014507	ENSSGRP00000030082	ENSSGRP00000014507	ENSSGRP00000030082	Exportin-1.	Adhesion G-protein coupled receptor D1-like.	0.915
ENSSGRP00000014507	ENSSGRP00000034502	ENSSGRP00000014507	ENSSGRP00000034502	Exportin-1.	RANBP2-like and GRIP domain-containing protein 5/6.	0.889
ENSSGRP00000014507	ENSSGRP00000090562	ENSSGRP00000014507	ENSSGRP00000090562	Exportin-1.	Exportin-1-like.	0.900
ENSSGRP00000014507	ENSSGRP00000108074	ENSSGRP00000014507	ENSSGRP00000108074	Exportin-1.	Ran-specific GTPase-activating protein-like.	0.889
ENSSGRP00000014507	LOC107560007	ENSSGRP00000014507	ENSSGRP00000065424	Exportin-1.	Snurportin-1-like isoform X1.	0.923
ENSSGRP00000014507	LOC107570969	ENSSGRP00000014507	ENSSGRP00000037592	Exportin-1.	Importin subunit beta-1-like.	0.660
ENSSGRP00000014507	LOC107573070	ENSSGRP00000014507	ENSSGRP00000057659	Exportin-1.	Importin subunit beta-1.	0.660