(13 nodes) cAMP-dependent protein kinase complex, and cAMP-dependent protein kinase activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000008919	annotation not available (61 aa)
	prkx	CAMP-dependent protein kinase catalytic subunit PRKX. (357 aa)
	ENSSGRP00000018620	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b. (253 aa)
	ENSSGRP00000037222	CAMP-dependent protein kinase catalytic subunit PRKX-like. (326 aa)
	LOC107587463	A-kinase anchor protein 1, mitochondrial-like isoform X1. (840 aa)
	ENSSGRP00000041152	Protein kinase, cAMP-dependent, catalytic, beta a. (291 aa)
	LOC107583360	A-kinase anchor protein 1, mitochondrial-like. (623 aa)
	ENSSGRP00000055745	A-kinase anchor protein 1, mitochondrial-like. (602 aa)
	LOC107591783	CAMP-dependent protein kinase type II-alpha regulatory subunit-like. (399 aa)
	LOC107592918	A-kinase anchor protein 1, mitochondrial-like. (840 aa)
	ENSSGRP00000070258	annotation not available (91 aa)
	PRKAR1B	Protein kinase cAMP-dependent type I regulatory subunit beta. (214 aa)
	LOC107590390	CAMP-dependent protein kinase type I-alpha regulatory subunit-like. (406 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000008919	ENSSGRP00000018620	ENSSGRP00000008919	ENSSGRP00000018620	annotation not available	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	0.772
ENSSGRP00000008919	ENSSGRP00000037222	ENSSGRP00000008919	ENSSGRP00000037222	annotation not available	CAMP-dependent protein kinase catalytic subunit PRKX-like.	0.772
ENSSGRP00000008919	ENSSGRP00000041152	ENSSGRP00000008919	ENSSGRP00000041152	annotation not available	Protein kinase, cAMP-dependent, catalytic, beta a.	0.772
ENSSGRP00000008919	ENSSGRP00000055745	ENSSGRP00000008919	ENSSGRP00000055745	annotation not available	A-kinase anchor protein 1, mitochondrial-like.	0.628
ENSSGRP00000008919	LOC107583360	ENSSGRP00000008919	ENSSGRP00000047657	annotation not available	A-kinase anchor protein 1, mitochondrial-like.	0.628
ENSSGRP00000008919	LOC107587463	ENSSGRP00000008919	ENSSGRP00000039317	annotation not available	A-kinase anchor protein 1, mitochondrial-like isoform X1.	0.628
ENSSGRP00000008919	LOC107592918	ENSSGRP00000008919	ENSSGRP00000059841	annotation not available	A-kinase anchor protein 1, mitochondrial-like.	0.628
ENSSGRP00000008919	prkx	ENSSGRP00000008919	ENSSGRP00000016700	annotation not available	CAMP-dependent protein kinase catalytic subunit PRKX.	0.772
ENSSGRP00000018620	ENSSGRP00000008919	ENSSGRP00000018620	ENSSGRP00000008919	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	annotation not available	0.772
ENSSGRP00000018620	ENSSGRP00000055745	ENSSGRP00000018620	ENSSGRP00000055745	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	A-kinase anchor protein 1, mitochondrial-like.	0.705
ENSSGRP00000018620	ENSSGRP00000070258	ENSSGRP00000018620	ENSSGRP00000070258	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	annotation not available	0.779
ENSSGRP00000018620	LOC107583360	ENSSGRP00000018620	ENSSGRP00000047657	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	A-kinase anchor protein 1, mitochondrial-like.	0.705
ENSSGRP00000018620	LOC107587463	ENSSGRP00000018620	ENSSGRP00000039317	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	A-kinase anchor protein 1, mitochondrial-like isoform X1.	0.705
ENSSGRP00000018620	LOC107590390	ENSSGRP00000018620	ENSSGRP00000105082	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	CAMP-dependent protein kinase type I-alpha regulatory subunit-like.	0.779
ENSSGRP00000018620	LOC107591783	ENSSGRP00000018620	ENSSGRP00000059009	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	CAMP-dependent protein kinase type II-alpha regulatory subunit-like.	0.772
ENSSGRP00000018620	LOC107592918	ENSSGRP00000018620	ENSSGRP00000059841	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	A-kinase anchor protein 1, mitochondrial-like.	0.705
ENSSGRP00000018620	PRKAR1B	ENSSGRP00000018620	ENSSGRP00000090228	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate b.	Protein kinase cAMP-dependent type I regulatory subunit beta.	0.772
ENSSGRP00000037222	ENSSGRP00000008919	ENSSGRP00000037222	ENSSGRP00000008919	CAMP-dependent protein kinase catalytic subunit PRKX-like.	annotation not available	0.772
ENSSGRP00000037222	ENSSGRP00000055745	ENSSGRP00000037222	ENSSGRP00000055745	CAMP-dependent protein kinase catalytic subunit PRKX-like.	A-kinase anchor protein 1, mitochondrial-like.	0.676
ENSSGRP00000037222	ENSSGRP00000070258	ENSSGRP00000037222	ENSSGRP00000070258	CAMP-dependent protein kinase catalytic subunit PRKX-like.	annotation not available	0.772