(13 nodes) Major intrinsic protein network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000005954	annotation not available (253 aa)
	ENSSGRP00000009221	Aquaporin-1-like. (279 aa)
	LOC107578446	Aquaporin-11-like isoform X1. (275 aa)
	LOC107567874	Aquaporin-1-like. (269 aa)
	LOC107572142	Aquaporin-4-like isoform X1. (331 aa)
	LOC107599065	Aquaporin-12-like. (280 aa)
	LOC107594225	Aquaporin-8-like. (260 aa)
	LOC107561047	Aquaporin-4-like isoform X1. (330 aa)
	LOC107601353	Lens fiber major intrinsic protein-like. (263 aa)
	LOC107562303	Aquaporin-8-like isoform X1. (253 aa)
	LOC107552570	Aquaporin-3-like isoform X1. (310 aa)
	ENSSGRP00000110904	Aquaporin-9-like. (183 aa)
	LOC107565996	Lens fiber major intrinsic protein-like. (263 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005954	ENSSGRP00000009221	ENSSGRP00000005954	ENSSGRP00000009221	annotation not available	Aquaporin-1-like.	0.516
ENSSGRP00000005954	LOC107561047	ENSSGRP00000005954	ENSSGRP00000088110	annotation not available	Aquaporin-4-like isoform X1.	0.683
ENSSGRP00000005954	LOC107562303	ENSSGRP00000005954	ENSSGRP00000094561	annotation not available	Aquaporin-8-like isoform X1.	0.758
ENSSGRP00000005954	LOC107565996	ENSSGRP00000005954	ENSSGRP00000111793	annotation not available	Lens fiber major intrinsic protein-like.	0.655
ENSSGRP00000005954	LOC107567874	ENSSGRP00000005954	ENSSGRP00000017966	annotation not available	Aquaporin-1-like.	0.519
ENSSGRP00000005954	LOC107572142	ENSSGRP00000005954	ENSSGRP00000062606	annotation not available	Aquaporin-4-like isoform X1.	0.684
ENSSGRP00000005954	LOC107578446	ENSSGRP00000005954	ENSSGRP00000011622	annotation not available	Aquaporin-11-like isoform X1.	0.617
ENSSGRP00000005954	LOC107594225	ENSSGRP00000005954	ENSSGRP00000069310	annotation not available	Aquaporin-8-like.	0.795
ENSSGRP00000005954	LOC107599065	ENSSGRP00000005954	ENSSGRP00000064751	annotation not available	Aquaporin-12-like.	0.606
ENSSGRP00000005954	LOC107601353	ENSSGRP00000005954	ENSSGRP00000088621	annotation not available	Lens fiber major intrinsic protein-like.	0.660
ENSSGRP00000009221	ENSSGRP00000005954	ENSSGRP00000009221	ENSSGRP00000005954	Aquaporin-1-like.	annotation not available	0.516
ENSSGRP00000009221	ENSSGRP00000110904	ENSSGRP00000009221	ENSSGRP00000110904	Aquaporin-1-like.	Aquaporin-9-like.	0.703
ENSSGRP00000009221	LOC107552570	ENSSGRP00000009221	ENSSGRP00000106156	Aquaporin-1-like.	Aquaporin-3-like isoform X1.	0.528
ENSSGRP00000009221	LOC107561047	ENSSGRP00000009221	ENSSGRP00000088110	Aquaporin-1-like.	Aquaporin-4-like isoform X1.	0.491
ENSSGRP00000009221	LOC107562303	ENSSGRP00000009221	ENSSGRP00000094561	Aquaporin-1-like.	Aquaporin-8-like isoform X1.	0.553
ENSSGRP00000009221	LOC107565996	ENSSGRP00000009221	ENSSGRP00000111793	Aquaporin-1-like.	Lens fiber major intrinsic protein-like.	0.499
ENSSGRP00000009221	LOC107572142	ENSSGRP00000009221	ENSSGRP00000062606	Aquaporin-1-like.	Aquaporin-4-like isoform X1.	0.491
ENSSGRP00000009221	LOC107578446	ENSSGRP00000009221	ENSSGRP00000011622	Aquaporin-1-like.	Aquaporin-11-like isoform X1.	0.570
ENSSGRP00000009221	LOC107594225	ENSSGRP00000009221	ENSSGRP00000069310	Aquaporin-1-like.	Aquaporin-8-like.	0.555
ENSSGRP00000009221	LOC107599065	ENSSGRP00000009221	ENSSGRP00000064751	Aquaporin-1-like.	Aquaporin-12-like.	0.519