(6 nodes) Cytoskeleton-nuclear membrane anchor activity network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000010974	Spectrin repeat containing, nuclear envelope 2b. (372 aa)
	ENSSGRP00000044183	SUN domain-containing protein 2-like isoform X1. (558 aa)
	ENSSGRP00000047987	Spectrin repeat containing, nuclear envelope 2b. (398 aa)
	syne4	Nesprin-4 isoform X1. (622 aa)
	ENSSGRP00000085110	annotation not available (243 aa)
	LOC107548595	Uncharacterized protein LOC107548595 isoform X1. (653 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000010974	ENSSGRP00000044183	ENSSGRP00000010974	ENSSGRP00000044183	Spectrin repeat containing, nuclear envelope 2b.	SUN domain-containing protein 2-like isoform X1.	0.632
ENSSGRP00000010974	ENSSGRP00000085110	ENSSGRP00000010974	ENSSGRP00000085110	Spectrin repeat containing, nuclear envelope 2b.	annotation not available	0.632
ENSSGRP00000044183	ENSSGRP00000010974	ENSSGRP00000044183	ENSSGRP00000010974	SUN domain-containing protein 2-like isoform X1.	Spectrin repeat containing, nuclear envelope 2b.	0.632
ENSSGRP00000044183	ENSSGRP00000047987	ENSSGRP00000044183	ENSSGRP00000047987	SUN domain-containing protein 2-like isoform X1.	Spectrin repeat containing, nuclear envelope 2b.	0.632
ENSSGRP00000044183	LOC107548595	ENSSGRP00000044183	ENSSGRP00000087837	SUN domain-containing protein 2-like isoform X1.	Uncharacterized protein LOC107548595 isoform X1.	0.632
ENSSGRP00000044183	syne4	ENSSGRP00000044183	ENSSGRP00000084431	SUN domain-containing protein 2-like isoform X1.	Nesprin-4 isoform X1.	0.632
ENSSGRP00000047987	ENSSGRP00000044183	ENSSGRP00000047987	ENSSGRP00000044183	Spectrin repeat containing, nuclear envelope 2b.	SUN domain-containing protein 2-like isoform X1.	0.632
ENSSGRP00000047987	ENSSGRP00000085110	ENSSGRP00000047987	ENSSGRP00000085110	Spectrin repeat containing, nuclear envelope 2b.	annotation not available	0.632
ENSSGRP00000085110	ENSSGRP00000010974	ENSSGRP00000085110	ENSSGRP00000010974	annotation not available	Spectrin repeat containing, nuclear envelope 2b.	0.632
ENSSGRP00000085110	ENSSGRP00000047987	ENSSGRP00000085110	ENSSGRP00000047987	annotation not available	Spectrin repeat containing, nuclear envelope 2b.	0.632
ENSSGRP00000085110	LOC107548595	ENSSGRP00000085110	ENSSGRP00000087837	annotation not available	Uncharacterized protein LOC107548595 isoform X1.	0.632
ENSSGRP00000085110	syne4	ENSSGRP00000085110	ENSSGRP00000084431	annotation not available	Nesprin-4 isoform X1.	0.632
LOC107548595	ENSSGRP00000044183	ENSSGRP00000087837	ENSSGRP00000044183	Uncharacterized protein LOC107548595 isoform X1.	SUN domain-containing protein 2-like isoform X1.	0.632
LOC107548595	ENSSGRP00000085110	ENSSGRP00000087837	ENSSGRP00000085110	Uncharacterized protein LOC107548595 isoform X1.	annotation not available	0.632
syne4	ENSSGRP00000044183	ENSSGRP00000084431	ENSSGRP00000044183	Nesprin-4 isoform X1.	SUN domain-containing protein 2-like isoform X1.	0.632
syne4	ENSSGRP00000085110	ENSSGRP00000084431	ENSSGRP00000085110	Nesprin-4 isoform X1.	annotation not available	0.632