(15 nodes) Mixed, incl. Growth-Arrest-Specific Protein 2 Domain, and Cul5-RING ubiquitin ligase complex network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aggf1	Angiogenic factor with G patch and FHA domains 1 isoform X1. (853 aa)
	ENSSGRP00000007364	GAS2-like protein 2. (285 aa)
	ENSSGRP00000013256	Ceramide kinase-like protein. (548 aa)
	ENSSGRP00000014450	annotation not available (359 aa)
	ENSSGRP00000020793	CTD small phosphatase-like protein 2. (280 aa)
	ENSSGRP00000026461	Kelch domain-containing protein 1-like. (385 aa)
	catip	Ciliogenesis-associated TTC17-interacting protein. (361 aa)
	ENSSGRP00000031487	Ciliogenesis associated TTC17 interacting protein. (262 aa)
	LOC107599929	GAS2-like protein 1. (1075 aa)
	ENSSGRP00000049107	annotation not available (311 aa)
	ENSSGRP00000060616	annotation not available (595 aa)
	ENSSGRP00000063501	Growth arrest specific 2 like 2. (671 aa)
	ENSSGRP00000067556	annotation not available (291 aa)
	ENSSGRP00000082736	GAS2-like protein 1. (409 aa)
	LOC107553546	CTD small phosphatase-like protein 2. (345 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007364	ENSSGRP00000014450	ENSSGRP00000007364	ENSSGRP00000014450	GAS2-like protein 2.	annotation not available	0.697
ENSSGRP00000007364	ENSSGRP00000031487	ENSSGRP00000007364	ENSSGRP00000031487	GAS2-like protein 2.	Ciliogenesis associated TTC17 interacting protein.	0.620
ENSSGRP00000007364	ENSSGRP00000049107	ENSSGRP00000007364	ENSSGRP00000049107	GAS2-like protein 2.	annotation not available	0.635
ENSSGRP00000007364	catip	ENSSGRP00000007364	ENSSGRP00000031233	GAS2-like protein 2.	Ciliogenesis-associated TTC17-interacting protein.	0.620
ENSSGRP00000013256	ENSSGRP00000014450	ENSSGRP00000013256	ENSSGRP00000014450	Ceramide kinase-like protein.	annotation not available	0.691
ENSSGRP00000014450	ENSSGRP00000007364	ENSSGRP00000014450	ENSSGRP00000007364	annotation not available	GAS2-like protein 2.	0.697
ENSSGRP00000014450	ENSSGRP00000013256	ENSSGRP00000014450	ENSSGRP00000013256	annotation not available	Ceramide kinase-like protein.	0.691
ENSSGRP00000014450	ENSSGRP00000063501	ENSSGRP00000014450	ENSSGRP00000063501	annotation not available	Growth arrest specific 2 like 2.	0.697
ENSSGRP00000014450	ENSSGRP00000082736	ENSSGRP00000014450	ENSSGRP00000082736	annotation not available	GAS2-like protein 1.	0.697
ENSSGRP00000014450	LOC107599929	ENSSGRP00000014450	ENSSGRP00000046997	annotation not available	GAS2-like protein 1.	0.697
ENSSGRP00000020793	ENSSGRP00000026461	ENSSGRP00000020793	ENSSGRP00000026461	CTD small phosphatase-like protein 2.	Kelch domain-containing protein 1-like.	0.436
ENSSGRP00000020793	ENSSGRP00000067556	ENSSGRP00000020793	ENSSGRP00000067556	CTD small phosphatase-like protein 2.	annotation not available	0.436
ENSSGRP00000026461	ENSSGRP00000020793	ENSSGRP00000026461	ENSSGRP00000020793	Kelch domain-containing protein 1-like.	CTD small phosphatase-like protein 2.	0.436
ENSSGRP00000026461	ENSSGRP00000060616	ENSSGRP00000026461	ENSSGRP00000060616	Kelch domain-containing protein 1-like.	annotation not available	0.507
ENSSGRP00000026461	LOC107553546	ENSSGRP00000026461	ENSSGRP00000086153	Kelch domain-containing protein 1-like.	CTD small phosphatase-like protein 2.	0.436
ENSSGRP00000026461	aggf1	ENSSGRP00000026461	ENSSGRP00000000342	Kelch domain-containing protein 1-like.	Angiogenic factor with G patch and FHA domains 1 isoform X1.	0.507
ENSSGRP00000031487	ENSSGRP00000007364	ENSSGRP00000031487	ENSSGRP00000007364	Ciliogenesis associated TTC17 interacting protein.	GAS2-like protein 2.	0.620
ENSSGRP00000031487	ENSSGRP00000063501	ENSSGRP00000031487	ENSSGRP00000063501	Ciliogenesis associated TTC17 interacting protein.	Growth arrest specific 2 like 2.	0.620
ENSSGRP00000031487	ENSSGRP00000082736	ENSSGRP00000031487	ENSSGRP00000082736	Ciliogenesis associated TTC17 interacting protein.	GAS2-like protein 1.	0.620
ENSSGRP00000031487	LOC107599929	ENSSGRP00000031487	ENSSGRP00000046997	Ciliogenesis associated TTC17 interacting protein.	GAS2-like protein 1.	0.620