STRINGSTRING
LOC107573124 LOC107573124 ENSSGRP00000012292 ENSSGRP00000012292 ENSSGRP00000054187 ENSSGRP00000054187 ENSSGRP00000081100 ENSSGRP00000081100 antxr2 antxr2 LOC107562278 LOC107562278 ENSSGRP00000088901 ENSSGRP00000088901 ENSSGRP00000088920 ENSSGRP00000088920 ENSSGRP00000091827 ENSSGRP00000091827 LOC107551805 LOC107551805
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107573124Collagen alpha-2(VI) chain-like isoform X1. (1016 aa)
ENSSGRP00000012292Collagen, type VI, alpha 1. (838 aa)
ENSSGRP00000054187LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like. (2279 aa)
ENSSGRP00000081100LOW QUALITY PROTEIN: chondroitin sulfate proteoglycan 4-like. (2330 aa)
antxr2Anthrax toxin receptor 2. (500 aa)
LOC107562278Chondroitin sulfate proteoglycan 4-like. (2300 aa)
ENSSGRP00000088901Collagen, type VI, alpha 3. (2573 aa)
ENSSGRP00000088920Collagen, type VI, alpha 3. (1557 aa)
ENSSGRP00000091827Collagen, type VI, alpha 1. (815 aa)
LOC107551805Collagen alpha-2(VI) chain-like isoform X1. (1016 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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