(7 nodes) Mixed, incl. Adherens junction maintenance, and Negative regulation of neutrophil migration network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107593314	SHC-transforming protein 2-like isoform X1. (539 aa)
	ENSSGRP00000022692	Inositol polyphosphate phosphatase-like 1a. (835 aa)
	LOC107586398	SHC-transforming protein 2-like isoform X1. (676 aa)
	LOC107583469	Tyrosine-protein kinase fyna. (537 aa)
	LOC107564973	Tyrosine-protein kinase fyna-like. (490 aa)
	Shc1	SHC-transforming protein 1 isoform X1. (578 aa)
	SHC3	SHC-transforming protein 3-like. (629 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000022692	LOC107564973	ENSSGRP00000022692	ENSSGRP00000071109	Inositol polyphosphate phosphatase-like 1a.	Tyrosine-protein kinase fyna-like.	0.513
ENSSGRP00000022692	LOC107583469	ENSSGRP00000022692	ENSSGRP00000067789	Inositol polyphosphate phosphatase-like 1a.	Tyrosine-protein kinase fyna.	0.513
ENSSGRP00000022692	LOC107586398	ENSSGRP00000022692	ENSSGRP00000060057	Inositol polyphosphate phosphatase-like 1a.	SHC-transforming protein 2-like isoform X1.	0.856
ENSSGRP00000022692	LOC107593314	ENSSGRP00000022692	ENSSGRP00000000864	Inositol polyphosphate phosphatase-like 1a.	SHC-transforming protein 2-like isoform X1.	0.856
ENSSGRP00000022692	SHC3	ENSSGRP00000022692	ENSSGRP00000094241	Inositol polyphosphate phosphatase-like 1a.	SHC-transforming protein 3-like.	0.881
ENSSGRP00000022692	Shc1	ENSSGRP00000022692	ENSSGRP00000078736	Inositol polyphosphate phosphatase-like 1a.	SHC-transforming protein 1 isoform X1.	0.881
LOC107564973	ENSSGRP00000022692	ENSSGRP00000071109	ENSSGRP00000022692	Tyrosine-protein kinase fyna-like.	Inositol polyphosphate phosphatase-like 1a.	0.513
LOC107564973	LOC107583469	ENSSGRP00000071109	ENSSGRP00000067789	Tyrosine-protein kinase fyna-like.	Tyrosine-protein kinase fyna.	0.900
LOC107564973	LOC107586398	ENSSGRP00000071109	ENSSGRP00000060057	Tyrosine-protein kinase fyna-like.	SHC-transforming protein 2-like isoform X1.	0.926
LOC107564973	LOC107593314	ENSSGRP00000071109	ENSSGRP00000000864	Tyrosine-protein kinase fyna-like.	SHC-transforming protein 2-like isoform X1.	0.926
LOC107564973	SHC3	ENSSGRP00000071109	ENSSGRP00000094241	Tyrosine-protein kinase fyna-like.	SHC-transforming protein 3-like.	0.949
LOC107564973	Shc1	ENSSGRP00000071109	ENSSGRP00000078736	Tyrosine-protein kinase fyna-like.	SHC-transforming protein 1 isoform X1.	0.949
LOC107583469	ENSSGRP00000022692	ENSSGRP00000067789	ENSSGRP00000022692	Tyrosine-protein kinase fyna.	Inositol polyphosphate phosphatase-like 1a.	0.513
LOC107583469	LOC107564973	ENSSGRP00000067789	ENSSGRP00000071109	Tyrosine-protein kinase fyna.	Tyrosine-protein kinase fyna-like.	0.900
LOC107583469	LOC107586398	ENSSGRP00000067789	ENSSGRP00000060057	Tyrosine-protein kinase fyna.	SHC-transforming protein 2-like isoform X1.	0.926
LOC107583469	LOC107593314	ENSSGRP00000067789	ENSSGRP00000000864	Tyrosine-protein kinase fyna.	SHC-transforming protein 2-like isoform X1.	0.926
LOC107583469	SHC3	ENSSGRP00000067789	ENSSGRP00000094241	Tyrosine-protein kinase fyna.	SHC-transforming protein 3-like.	0.949
LOC107583469	Shc1	ENSSGRP00000067789	ENSSGRP00000078736	Tyrosine-protein kinase fyna.	SHC-transforming protein 1 isoform X1.	0.949
LOC107586398	ENSSGRP00000022692	ENSSGRP00000060057	ENSSGRP00000022692	SHC-transforming protein 2-like isoform X1.	Inositol polyphosphate phosphatase-like 1a.	0.856
LOC107586398	LOC107564973	ENSSGRP00000060057	ENSSGRP00000071109	SHC-transforming protein 2-like isoform X1.	Tyrosine-protein kinase fyna-like.	0.926