(16 nodes) Sema4D induced cell migration and growth-cone collapse, and Regulator of G protein signalling-like domain network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000007186	Plexin-B2-like. (1873 aa)
	ENSSGRP00000035917	Plexin-B2-like. (238 aa)
	LOC107586348	Plexin-B1-like isoform X1. (2207 aa)
	LOC107600972	Rho-related GTP-binding protein RhoE-like. (243 aa)
	ENSSGRP00000042491	Rho guanine nucleotide exchange factor (GEF) 11. (1366 aa)
	SEMA4D	Semaphorin-4D-like. (872 aa)
	ENSSGRP00000043383	annotation not available (114 aa)
	LOC107586959	Rho-related GTP-binding protein RhoE. (243 aa)
	LOC107586415	Semaphorin-4E-like isoform X1. (816 aa)
	ENSSGRP00000064947	annotation not available (104 aa)
	LOC107563659	Rho-related GTP-binding protein Rho6-like. (232 aa)
	ENSSGRP00000069320	Rho-associated, coiled-coil containing protein kinase 2a. (1333 aa)
	ENSSGRP00000074534	Rho guanine nucleotide exchange factor (GEF) 12a. (1166 aa)
	ENSSGRP00000094364	Semaphorin-4D-like isoform X1. (887 aa)
	ENSSGRP00000102054	LOW QUALITY PROTEIN: plexin-B1-like. (2210 aa)
	ENSSGRP00000106541	Rho guanine nucleotide exchange factor (GEF) 12b. (1407 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000007186	ENSSGRP00000042491	ENSSGRP00000007186	ENSSGRP00000042491	Plexin-B2-like.	Rho guanine nucleotide exchange factor (GEF) 11.	0.529
ENSSGRP00000007186	ENSSGRP00000043383	ENSSGRP00000007186	ENSSGRP00000043383	Plexin-B2-like.	annotation not available	0.693
ENSSGRP00000007186	ENSSGRP00000074534	ENSSGRP00000007186	ENSSGRP00000074534	Plexin-B2-like.	Rho guanine nucleotide exchange factor (GEF) 12a.	0.529
ENSSGRP00000007186	ENSSGRP00000094364	ENSSGRP00000007186	ENSSGRP00000094364	Plexin-B2-like.	Semaphorin-4D-like isoform X1.	0.693
ENSSGRP00000007186	ENSSGRP00000106541	ENSSGRP00000007186	ENSSGRP00000106541	Plexin-B2-like.	Rho guanine nucleotide exchange factor (GEF) 12b.	0.529
ENSSGRP00000007186	LOC107563659	ENSSGRP00000007186	ENSSGRP00000066322	Plexin-B2-like.	Rho-related GTP-binding protein Rho6-like.	0.568
ENSSGRP00000007186	LOC107586415	ENSSGRP00000007186	ENSSGRP00000063041	Plexin-B2-like.	Semaphorin-4E-like isoform X1.	0.693
ENSSGRP00000007186	LOC107586959	ENSSGRP00000007186	ENSSGRP00000056105	Plexin-B2-like.	Rho-related GTP-binding protein RhoE.	0.568
ENSSGRP00000007186	LOC107600972	ENSSGRP00000007186	ENSSGRP00000039225	Plexin-B2-like.	Rho-related GTP-binding protein RhoE-like.	0.568
ENSSGRP00000007186	SEMA4D	ENSSGRP00000007186	ENSSGRP00000043377	Plexin-B2-like.	Semaphorin-4D-like.	0.693
ENSSGRP00000035917	ENSSGRP00000042491	ENSSGRP00000035917	ENSSGRP00000042491	Plexin-B2-like.	Rho guanine nucleotide exchange factor (GEF) 11.	0.529
ENSSGRP00000035917	ENSSGRP00000043383	ENSSGRP00000035917	ENSSGRP00000043383	Plexin-B2-like.	annotation not available	0.693
ENSSGRP00000035917	ENSSGRP00000074534	ENSSGRP00000035917	ENSSGRP00000074534	Plexin-B2-like.	Rho guanine nucleotide exchange factor (GEF) 12a.	0.529
ENSSGRP00000035917	ENSSGRP00000094364	ENSSGRP00000035917	ENSSGRP00000094364	Plexin-B2-like.	Semaphorin-4D-like isoform X1.	0.693
ENSSGRP00000035917	ENSSGRP00000106541	ENSSGRP00000035917	ENSSGRP00000106541	Plexin-B2-like.	Rho guanine nucleotide exchange factor (GEF) 12b.	0.529
ENSSGRP00000035917	LOC107563659	ENSSGRP00000035917	ENSSGRP00000066322	Plexin-B2-like.	Rho-related GTP-binding protein Rho6-like.	0.568
ENSSGRP00000035917	LOC107586415	ENSSGRP00000035917	ENSSGRP00000063041	Plexin-B2-like.	Semaphorin-4E-like isoform X1.	0.693
ENSSGRP00000035917	LOC107586959	ENSSGRP00000035917	ENSSGRP00000056105	Plexin-B2-like.	Rho-related GTP-binding protein RhoE.	0.568
ENSSGRP00000035917	LOC107600972	ENSSGRP00000035917	ENSSGRP00000039225	Plexin-B2-like.	Rho-related GTP-binding protein RhoE-like.	0.568
ENSSGRP00000035917	SEMA4D	ENSSGRP00000035917	ENSSGRP00000043377	Plexin-B2-like.	Semaphorin-4D-like.	0.693