(12 nodes) Protein farnesyltransferase complex, and CAAX-box protein processing network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107591113	Protein-S-isoprenylcysteine O-methyltransferase-like isoform X1. (292 aa)
	LOC107593379	Protein-S-isoprenylcysteine O-methyltransferase-like. (292 aa)
	pggt1b	Geranylgeranyl transferase type-1 subunit beta. (358 aa)
	ENSSGRP00000052413	Protein farnesyltransferase subunit beta-like. (388 aa)
	LOC107583239	CAAX prenyl protease 1 homolog. (484 aa)
	ENSSGRP00000073790	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like. (352 aa)
	LOC107556846	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like. (394 aa)
	ENSSGRP00000081585	Ras converting CAAX endopeptidase 1a. (213 aa)
	rce1	Prenyl protein peptidase. (313 aa)
	LOC107555763	Protein Churchill isoform X1. (130 aa)
	ENSSGRP00000099238	Protein farnesyltransferase subunit beta-like. (366 aa)
	ENSSGRP00000105219	Ras converting CAAX endopeptidase 1b. (207 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000052413	ENSSGRP00000073790	ENSSGRP00000052413	ENSSGRP00000073790	Protein farnesyltransferase subunit beta-like.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	0.997
ENSSGRP00000052413	ENSSGRP00000081585	ENSSGRP00000052413	ENSSGRP00000081585	Protein farnesyltransferase subunit beta-like.	Ras converting CAAX endopeptidase 1a.	0.750
ENSSGRP00000052413	ENSSGRP00000099238	ENSSGRP00000052413	ENSSGRP00000099238	Protein farnesyltransferase subunit beta-like.	Protein farnesyltransferase subunit beta-like.	0.901
ENSSGRP00000052413	ENSSGRP00000105219	ENSSGRP00000052413	ENSSGRP00000105219	Protein farnesyltransferase subunit beta-like.	Ras converting CAAX endopeptidase 1b.	0.750
ENSSGRP00000052413	LOC107556846	ENSSGRP00000052413	ENSSGRP00000079195	Protein farnesyltransferase subunit beta-like.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	0.997
ENSSGRP00000052413	LOC107583239	ENSSGRP00000052413	ENSSGRP00000057206	Protein farnesyltransferase subunit beta-like.	CAAX prenyl protease 1 homolog.	0.962
ENSSGRP00000052413	LOC107591113	ENSSGRP00000052413	ENSSGRP00000021849	Protein farnesyltransferase subunit beta-like.	Protein-S-isoprenylcysteine O-methyltransferase-like isoform X1.	0.565
ENSSGRP00000052413	LOC107593379	ENSSGRP00000052413	ENSSGRP00000028986	Protein farnesyltransferase subunit beta-like.	Protein-S-isoprenylcysteine O-methyltransferase-like.	0.565
ENSSGRP00000052413	pggt1b	ENSSGRP00000052413	ENSSGRP00000040869	Protein farnesyltransferase subunit beta-like.	Geranylgeranyl transferase type-1 subunit beta.	0.459
ENSSGRP00000052413	rce1	ENSSGRP00000052413	ENSSGRP00000083623	Protein farnesyltransferase subunit beta-like.	Prenyl protein peptidase.	0.973
ENSSGRP00000073790	ENSSGRP00000052413	ENSSGRP00000073790	ENSSGRP00000052413	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Protein farnesyltransferase subunit beta-like.	0.997
ENSSGRP00000073790	ENSSGRP00000081585	ENSSGRP00000073790	ENSSGRP00000081585	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Ras converting CAAX endopeptidase 1a.	0.813
ENSSGRP00000073790	ENSSGRP00000099238	ENSSGRP00000073790	ENSSGRP00000099238	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Protein farnesyltransferase subunit beta-like.	0.997
ENSSGRP00000073790	ENSSGRP00000105219	ENSSGRP00000073790	ENSSGRP00000105219	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Ras converting CAAX endopeptidase 1b.	0.813
ENSSGRP00000073790	LOC107555763	ENSSGRP00000073790	ENSSGRP00000090589	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Protein Churchill isoform X1.	0.975
ENSSGRP00000073790	LOC107556846	ENSSGRP00000073790	ENSSGRP00000079195	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	0.901
ENSSGRP00000073790	LOC107583239	ENSSGRP00000073790	ENSSGRP00000057206	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	CAAX prenyl protease 1 homolog.	0.963
ENSSGRP00000073790	LOC107591113	ENSSGRP00000073790	ENSSGRP00000021849	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Protein-S-isoprenylcysteine O-methyltransferase-like isoform X1.	0.636
ENSSGRP00000073790	LOC107593379	ENSSGRP00000073790	ENSSGRP00000028986	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Protein-S-isoprenylcysteine O-methyltransferase-like.	0.636
ENSSGRP00000073790	pggt1b	ENSSGRP00000073790	ENSSGRP00000040869	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like.	Geranylgeranyl transferase type-1 subunit beta.	0.999