(6 nodes) Mixed, incl. Tubulin C-terminal domain, and Doublecortin network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000005855	Tubulin alpha chain-like. (123 aa)
	LOC107587400	Tubulin beta-4B chain-like. (445 aa)
	LOC107593982	Tubulin alpha-1A chain. (465 aa)
	ENSSGRP00000038245	Serine/threonine-protein kinase DCLK1-like. (449 aa)
	ENSSGRP00000038248	annotation not available (209 aa)
	LOC107589111	Tubulin beta-4B chain-like. (445 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000005855	ENSSGRP00000038245	ENSSGRP00000005855	ENSSGRP00000038245	Tubulin alpha chain-like.	Serine/threonine-protein kinase DCLK1-like.	0.733
ENSSGRP00000005855	ENSSGRP00000038248	ENSSGRP00000005855	ENSSGRP00000038248	Tubulin alpha chain-like.	annotation not available	0.733
ENSSGRP00000005855	LOC107587400	ENSSGRP00000005855	ENSSGRP00000028267	Tubulin alpha chain-like.	Tubulin beta-4B chain-like.	0.972
ENSSGRP00000005855	LOC107589111	ENSSGRP00000005855	ENSSGRP00000072437	Tubulin alpha chain-like.	Tubulin beta-4B chain-like.	0.958
ENSSGRP00000038245	ENSSGRP00000005855	ENSSGRP00000038245	ENSSGRP00000005855	Serine/threonine-protein kinase DCLK1-like.	Tubulin alpha chain-like.	0.733
ENSSGRP00000038245	ENSSGRP00000038248	ENSSGRP00000038245	ENSSGRP00000038248	Serine/threonine-protein kinase DCLK1-like.	annotation not available	0.517
ENSSGRP00000038245	LOC107587400	ENSSGRP00000038245	ENSSGRP00000028267	Serine/threonine-protein kinase DCLK1-like.	Tubulin beta-4B chain-like.	0.728
ENSSGRP00000038245	LOC107589111	ENSSGRP00000038245	ENSSGRP00000072437	Serine/threonine-protein kinase DCLK1-like.	Tubulin beta-4B chain-like.	0.728
ENSSGRP00000038245	LOC107593982	ENSSGRP00000038245	ENSSGRP00000033472	Serine/threonine-protein kinase DCLK1-like.	Tubulin alpha-1A chain.	0.733
ENSSGRP00000038248	ENSSGRP00000005855	ENSSGRP00000038248	ENSSGRP00000005855	annotation not available	Tubulin alpha chain-like.	0.733
ENSSGRP00000038248	ENSSGRP00000038245	ENSSGRP00000038248	ENSSGRP00000038245	annotation not available	Serine/threonine-protein kinase DCLK1-like.	0.517
ENSSGRP00000038248	LOC107587400	ENSSGRP00000038248	ENSSGRP00000028267	annotation not available	Tubulin beta-4B chain-like.	0.728
ENSSGRP00000038248	LOC107589111	ENSSGRP00000038248	ENSSGRP00000072437	annotation not available	Tubulin beta-4B chain-like.	0.728
ENSSGRP00000038248	LOC107593982	ENSSGRP00000038248	ENSSGRP00000033472	annotation not available	Tubulin alpha-1A chain.	0.733
LOC107587400	ENSSGRP00000005855	ENSSGRP00000028267	ENSSGRP00000005855	Tubulin beta-4B chain-like.	Tubulin alpha chain-like.	0.972
LOC107587400	ENSSGRP00000038245	ENSSGRP00000028267	ENSSGRP00000038245	Tubulin beta-4B chain-like.	Serine/threonine-protein kinase DCLK1-like.	0.728
LOC107587400	ENSSGRP00000038248	ENSSGRP00000028267	ENSSGRP00000038248	Tubulin beta-4B chain-like.	annotation not available	0.728
LOC107587400	LOC107589111	ENSSGRP00000028267	ENSSGRP00000072437	Tubulin beta-4B chain-like.	Tubulin beta-4B chain-like.	0.766
LOC107587400	LOC107593982	ENSSGRP00000028267	ENSSGRP00000033472	Tubulin beta-4B chain-like.	Tubulin alpha-1A chain.	0.971
LOC107589111	ENSSGRP00000005855	ENSSGRP00000072437	ENSSGRP00000005855	Tubulin beta-4B chain-like.	Tubulin alpha chain-like.	0.958