(5 nodes) C-terminal leucine zipper domain of cyclic nucleotide-gated channels , and Mesenchyme migration network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSSGRP00000006623	Troponin T, cardiac muscle isoforms-like. (264 aa)
	LOC107549542	Actin, alpha cardiac muscle 1. (377 aa)
	LOC107549100	Actin, alpha cardiac muscle. (377 aa)
	LOC107599555	Tropomyosin alpha-3 chain isoform X1. (286 aa)
	tpm4	Tropomyosin alpha-4 chain isoform X1. (296 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000006623	LOC107549100	ENSSGRP00000006623	ENSSGRP00000052743	Troponin T, cardiac muscle isoforms-like.	Actin, alpha cardiac muscle.	0.929
ENSSGRP00000006623	LOC107549542	ENSSGRP00000006623	ENSSGRP00000041109	Troponin T, cardiac muscle isoforms-like.	Actin, alpha cardiac muscle 1.	0.924
ENSSGRP00000006623	LOC107599555	ENSSGRP00000006623	ENSSGRP00000072997	Troponin T, cardiac muscle isoforms-like.	Tropomyosin alpha-3 chain isoform X1.	0.892
ENSSGRP00000006623	tpm4	ENSSGRP00000006623	ENSSGRP00000077927	Troponin T, cardiac muscle isoforms-like.	Tropomyosin alpha-4 chain isoform X1.	0.892
LOC107549100	ENSSGRP00000006623	ENSSGRP00000052743	ENSSGRP00000006623	Actin, alpha cardiac muscle.	Troponin T, cardiac muscle isoforms-like.	0.929
LOC107549100	LOC107549542	ENSSGRP00000052743	ENSSGRP00000041109	Actin, alpha cardiac muscle.	Actin, alpha cardiac muscle 1.	0.910
LOC107549100	LOC107599555	ENSSGRP00000052743	ENSSGRP00000072997	Actin, alpha cardiac muscle.	Tropomyosin alpha-3 chain isoform X1.	0.960
LOC107549100	tpm4	ENSSGRP00000052743	ENSSGRP00000077927	Actin, alpha cardiac muscle.	Tropomyosin alpha-4 chain isoform X1.	0.959
LOC107549542	ENSSGRP00000006623	ENSSGRP00000041109	ENSSGRP00000006623	Actin, alpha cardiac muscle 1.	Troponin T, cardiac muscle isoforms-like.	0.924
LOC107549542	LOC107549100	ENSSGRP00000041109	ENSSGRP00000052743	Actin, alpha cardiac muscle 1.	Actin, alpha cardiac muscle.	0.910
LOC107549542	LOC107599555	ENSSGRP00000041109	ENSSGRP00000072997	Actin, alpha cardiac muscle 1.	Tropomyosin alpha-3 chain isoform X1.	0.959
LOC107549542	tpm4	ENSSGRP00000041109	ENSSGRP00000077927	Actin, alpha cardiac muscle 1.	Tropomyosin alpha-4 chain isoform X1.	0.960
LOC107599555	ENSSGRP00000006623	ENSSGRP00000072997	ENSSGRP00000006623	Tropomyosin alpha-3 chain isoform X1.	Troponin T, cardiac muscle isoforms-like.	0.892
LOC107599555	LOC107549100	ENSSGRP00000072997	ENSSGRP00000052743	Tropomyosin alpha-3 chain isoform X1.	Actin, alpha cardiac muscle.	0.960
LOC107599555	LOC107549542	ENSSGRP00000072997	ENSSGRP00000041109	Tropomyosin alpha-3 chain isoform X1.	Actin, alpha cardiac muscle 1.	0.959
tpm4	ENSSGRP00000006623	ENSSGRP00000077927	ENSSGRP00000006623	Tropomyosin alpha-4 chain isoform X1.	Troponin T, cardiac muscle isoforms-like.	0.892
tpm4	LOC107549100	ENSSGRP00000077927	ENSSGRP00000052743	Tropomyosin alpha-4 chain isoform X1.	Actin, alpha cardiac muscle.	0.959
tpm4	LOC107549542	ENSSGRP00000077927	ENSSGRP00000041109	Tropomyosin alpha-4 chain isoform X1.	Actin, alpha cardiac muscle 1.	0.960