STRINGSTRING
ENSSGRP00000000939 ENSSGRP00000000939 ENSSGRP00000001167 ENSSGRP00000001167 LOC107595521 LOC107595521 TCEA3 TCEA3 ENSSGRP00000009522 ENSSGRP00000009522 POLR2B POLR2B ENSSGRP00000015105 ENSSGRP00000015105 ENSSGRP00000020706 ENSSGRP00000020706 LOC107574555 LOC107574555 LOC107586261 LOC107586261 ENSSGRP00000025310 ENSSGRP00000025310 LOC107556578 LOC107556578 ENSSGRP00000030567 ENSSGRP00000030567 ENSSGRP00000032271 ENSSGRP00000032271 ENSSGRP00000035273 ENSSGRP00000035273 ENSSGRP00000037668 ENSSGRP00000037668 LOC107558928 LOC107558928 ENSSGRP00000041033 ENSSGRP00000041033 ENSSGRP00000046062 ENSSGRP00000046062 ENSSGRP00000046487 ENSSGRP00000046487 LOC107550080 LOC107550080 LOC107584383 LOC107584383 LOC107563608 LOC107563608 LOC107561545 LOC107561545 LOC107553014 LOC107553014 LOC107588567 LOC107588567 ENSSGRP00000062218 ENSSGRP00000062218 POLR2C POLR2C LOC107571665 LOC107571665 LOC107584254 LOC107584254 rtf1 rtf1 LOC107587688 LOC107587688 ssrp1 ssrp1 ENSSGRP00000075460 ENSSGRP00000075460 LOC107591298-2 LOC107591298-2 ENSSGRP00000084029 ENSSGRP00000084029 leo1 leo1 LOC107596300 LOC107596300 ENSSGRP00000086583 ENSSGRP00000086583 polr2i polr2i LOC107554702 LOC107554702 LOC107591514 LOC107591514 ENSSGRP00000096558 ENSSGRP00000096558 LOC107597543 LOC107597543 POLR2F POLR2F LOC107563417 LOC107563417 ENSSGRP00000103247 ENSSGRP00000103247 ENSSGRP00000104783 ENSSGRP00000104783 ENSSGRP00000104847 ENSSGRP00000104847 gtf2f1 gtf2f1 LOC107593758 LOC107593758 rpap2 rpap2 ENSSGRP00000112499 ENSSGRP00000112499
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSSGRP00000000939PAF1 homolog, Paf1/RNA polymerase II complex component. (336 aa)
ENSSGRP00000001167annotation not available (717 aa)
LOC107595521DNA-directed RNA polymerase II subunit RPB11-a-like. (183 aa)
TCEA3Transcription elongation factor A3. (153 aa)
ENSSGRP00000009522annotation not available (64 aa)
POLR2BRNA polymerase II subunit B. (1169 aa)
ENSSGRP00000015105General transcription factor IIF, polypeptide 2a. (253 aa)
ENSSGRP00000020706annotation not available (45 aa)
LOC107574555FACT complex subunit SPT16-like. (816 aa)
LOC107586261Transcription elongation factor SPT5-like isoform X1. (1080 aa)
ENSSGRP00000025310RNA polymerase-associated protein CTR9 homolog. (1117 aa)
LOC107556578DNA-directed RNA polymerase II subunit RPB1-like. (1965 aa)
ENSSGRP00000030567annotation not available (572 aa)
ENSSGRP00000032271PAF1 homolog, Paf1/RNA polymerase II complex component. (461 aa)
ENSSGRP00000035273DNA-directed RNA polymerase II subunit RPB7-like. (186 aa)
ENSSGRP00000037668annotation not available (237 aa)
LOC107558928Transcription elongation factor A protein 1-like. (309 aa)
ENSSGRP00000041033LEO1 homolog, Paf1/RNA polymerase II complex component. (554 aa)
ENSSGRP00000046062RNA polymerase II subunit A C-terminal domain phosphatase-like. (880 aa)
ENSSGRP00000046487RNA polymerase II subunit A C-terminal domain phosphatase-like. (241 aa)
LOC107550080DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC107584383DNA-directed RNA polymerase II subunit RPB1 isoform X1. (1965 aa)
LOC107563608DNA-directed RNA polymerase II subunit RPB7. (185 aa)
LOC107561545Cyclin-dependent kinase 2-interacting protein-like isoform X1. (217 aa)
LOC107553014RNA polymerase-associated protein CTR9 homolog. (1159 aa)
LOC107588567RNA polymerase-associated protein RTF1 homolog. (678 aa)
ENSSGRP00000062218annotation not available (67 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3-like. (220 aa)
LOC107571665Transcription elongation factor A protein 2-like. (302 aa)
LOC107584254Transcription elongation factor A protein 1-like. (309 aa)
rtf1RNA polymerase-associated protein RTF1 homolog isoform X1. (716 aa)
LOC107587688DNA-directed RNA polymerase II subunit RPB11-a. (121 aa)
ssrp1Structure-specific recognition protein 1. (728 aa)
ENSSGRP00000075460annotation not available (183 aa)
LOC107591298-2DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
ENSSGRP00000084029Transcription elongation factor SPT6 isoform X1. (1710 aa)
leo1RNA polymerase-associated protein LEO1. (621 aa)
LOC107596300DNA-directed RNA polymerases I, II, and III subunit RPABC1-like. (210 aa)
ENSSGRP00000086583Cyclin-dependent kinase 2 interacting protein. (204 aa)
polr2iDNA-directed RNA polymerase II subunit RPB9. (126 aa)
LOC107554702Structure-specific recognition protein 1. (544 aa)
LOC107591514Transcription elongation factor SPT4-like. (117 aa)
ENSSGRP00000096558Parafibromin-like. (458 aa)
LOC107597543Transcription elongation factor SPT5 isoform X1. (1077 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (226 aa)
LOC107563417Transcription elongation factor SPT4 isoform X1. (117 aa)
ENSSGRP00000103247Structure specific recognition protein 1a. (586 aa)
ENSSGRP00000104783Transcription elongation factor SPT6-like. (1637 aa)
ENSSGRP00000104847Protein IWS1 homolog isoform X1. (442 aa)
gtf2f1General transcription factor IIF subunit 1 isoform X1. (532 aa)
LOC107593758Parafibromin. (530 aa)
rpap2Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1. (621 aa)
ENSSGRP00000112499Transcription initiation factor TFIIF subunit beta. (146 aa)
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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