(38 nodes) Mixed, incl. Leukocyte degranulation, and Rabaptin network (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107591611	Vacuolar protein sorting-associated protein 45-like isoform X1. (571 aa)
	ENSSGRP00000004904	Vesicle-associated membrane protein 7-like. (177 aa)
	ENSSGRP00000005451	Ankyrin repeat domain 27 (VPS9 domain). (888 aa)
	RAB5A	RAB5A, member RAS oncogene family. (61 aa)
	ENSSGRP00000009081	annotation not available (71 aa)
	Rbsn	Rabenosyn-5. (739 aa)
	LOC107590564	Rab GTPase-binding effector protein 2-like. (457 aa)
	LOC107598172	Ras-related protein Rab-5B-like. (214 aa)
	LOC107573533	ADP-ribosylation factor-binding protein GGA3-like isoform X1. (693 aa)
	ENSSGRP00000017085	annotation not available (186 aa)
	LOC107597410	Rabankyrin-5-like. (1169 aa)
	LOC107577469	Rab5 GDP/GTP exchange factor-like isoform X1. (551 aa)
	ENSSGRP00000030289	Ras-related protein Rab-5C-like. (250 aa)
	ENSSGRP00000034707	RAB guanine nucleotide exchange factor (GEF) 1, like. (455 aa)
	rab21	Ras-related protein Rab-21. (220 aa)
	ENSSGRP00000040142	RAB5A, member RAS oncogene family, b. (121 aa)
	LOC107550582	GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1. (1478 aa)
	LOC107549571	Rabenosyn-5-like isoform X1. (738 aa)
	rab31	Ras-related protein Rab-22. (194 aa)
	vamp7	Vesicle-associated membrane protein 7. (220 aa)
	ENSSGRP00000055376	RAB guanine nucleotide exchange factor (GEF) 1. (390 aa)
	LOC107553935	Early endosome antigen 1-like. (1369 aa)
	Rabep1	LOW QUALITY PROTEIN: rab GTPase-binding effector protein 1. (835 aa)
	LOC107555697	Ankyrin repeat domain-containing protein 27-like isoform X1. (1081 aa)
	ENSSGRP00000071444	annotation not available (85 aa)
	ENSSGRP00000073287	GTPase-activating protein and VPS9 domain-containing protein 1-like. (1386 aa)
	LOC107596793	Ras-related protein Rab-22A isoform X1. (198 aa)
	ENSSGRP00000076312	Early endosome antigen 1-like isoform X1. (1390 aa)
	ENSSGRP00000077242	RAB21, member RAS oncogene family. (214 aa)
	ENSSGRP00000080880	Rabaptin, RAB GTPase binding effector protein 1. (758 aa)
	ENSSGRP00000080884	Rab GTPase-binding effector protein 1-like. (55 aa)
	LOC107567272	Ras-related protein Rab-4B. (213 aa)
	LOC107593545	Vacuolar protein sorting-associated protein 45-like. (568 aa)
	LOC107554197	Ras-related protein Rab-22A-like. (196 aa)
	ENSSGRP00000092711	Rab GTPase-binding effector protein 2-like. (472 aa)
	RAB20-2	Ras-related protein Rab-20-like. (246 aa)
	LOC107592111	Ras-related protein Rab-5A-like. (216 aa)
	LOC107551955	Ras-related protein Rab-5B-like. (214 aa)

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000004904	ENSSGRP00000005451	ENSSGRP00000004904	ENSSGRP00000005451	Vesicle-associated membrane protein 7-like.	Ankyrin repeat domain 27 (VPS9 domain).	0.898
ENSSGRP00000004904	ENSSGRP00000030289	ENSSGRP00000004904	ENSSGRP00000030289	Vesicle-associated membrane protein 7-like.	Ras-related protein Rab-5C-like.	0.500
ENSSGRP00000004904	ENSSGRP00000034707	ENSSGRP00000004904	ENSSGRP00000034707	Vesicle-associated membrane protein 7-like.	RAB guanine nucleotide exchange factor (GEF) 1, like.	0.620
ENSSGRP00000004904	ENSSGRP00000040142	ENSSGRP00000004904	ENSSGRP00000040142	Vesicle-associated membrane protein 7-like.	RAB5A, member RAS oncogene family, b.	0.500
ENSSGRP00000004904	ENSSGRP00000055376	ENSSGRP00000004904	ENSSGRP00000055376	Vesicle-associated membrane protein 7-like.	RAB guanine nucleotide exchange factor (GEF) 1.	0.620
ENSSGRP00000004904	ENSSGRP00000071444	ENSSGRP00000004904	ENSSGRP00000071444	Vesicle-associated membrane protein 7-like.	annotation not available	0.620
ENSSGRP00000004904	ENSSGRP00000073287	ENSSGRP00000004904	ENSSGRP00000073287	Vesicle-associated membrane protein 7-like.	GTPase-activating protein and VPS9 domain-containing protein 1-like.	0.610
ENSSGRP00000004904	ENSSGRP00000077242	ENSSGRP00000004904	ENSSGRP00000077242	Vesicle-associated membrane protein 7-like.	RAB21, member RAS oncogene family.	0.517
ENSSGRP00000004904	LOC107550582	ENSSGRP00000004904	ENSSGRP00000041817	Vesicle-associated membrane protein 7-like.	GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1.	0.610
ENSSGRP00000004904	LOC107551955	ENSSGRP00000004904	ENSSGRP00000112487	Vesicle-associated membrane protein 7-like.	Ras-related protein Rab-5B-like.	0.500
ENSSGRP00000004904	LOC107555697	ENSSGRP00000004904	ENSSGRP00000065780	Vesicle-associated membrane protein 7-like.	Ankyrin repeat domain-containing protein 27-like isoform X1.	0.898
ENSSGRP00000004904	LOC107577469	ENSSGRP00000004904	ENSSGRP00000028638	Vesicle-associated membrane protein 7-like.	Rab5 GDP/GTP exchange factor-like isoform X1.	0.620
ENSSGRP00000004904	LOC107592111	ENSSGRP00000004904	ENSSGRP00000106946	Vesicle-associated membrane protein 7-like.	Ras-related protein Rab-5A-like.	0.500
ENSSGRP00000004904	LOC107598172	ENSSGRP00000004904	ENSSGRP00000012224	Vesicle-associated membrane protein 7-like.	Ras-related protein Rab-5B-like.	0.500
ENSSGRP00000004904	RAB5A	ENSSGRP00000004904	ENSSGRP00000007538	Vesicle-associated membrane protein 7-like.	RAB5A, member RAS oncogene family.	0.500
ENSSGRP00000004904	rab21	ENSSGRP00000004904	ENSSGRP00000034899	Vesicle-associated membrane protein 7-like.	Ras-related protein Rab-21.	0.517
ENSSGRP00000004904	vamp7	ENSSGRP00000004904	ENSSGRP00000045080	Vesicle-associated membrane protein 7-like.	Vesicle-associated membrane protein 7.	0.901
ENSSGRP00000005451	ENSSGRP00000004904	ENSSGRP00000005451	ENSSGRP00000004904	Ankyrin repeat domain 27 (VPS9 domain).	Vesicle-associated membrane protein 7-like.	0.898
ENSSGRP00000005451	ENSSGRP00000009081	ENSSGRP00000005451	ENSSGRP00000009081	Ankyrin repeat domain 27 (VPS9 domain).	annotation not available	0.667
ENSSGRP00000005451	ENSSGRP00000017085	ENSSGRP00000005451	ENSSGRP00000017085	Ankyrin repeat domain 27 (VPS9 domain).	annotation not available	0.898